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col_cluster <- list()
col_cluster[["SubType_Layer"]] <- c(
"L2/3 IT" = '#ffda11', "L4/5 IT" = '#f68d45', "L5 IT" = '#26d5ff', "L6 IT" = '#f05a9e',
"L5 PT" = '#6d92ff', "L5 NP" = '#8976ff', "L6 CT" = '#e01fff',
'Pvalb' = '#c48983', 'Sst' = '#c7b766', 'Vip' = '#0092b6', 'Lamp5' = '#a9d166',
"Astro" = '#d08fbe', "Endo" = '#bb7967', "Microglia" = '#00a7cf', "Oligo" = '#5e45a6',
"OPC" = '#1470d6')
col_cluster[["SubType"]] <- c(
"L2/3_IT_1"='#ffd600', "L2/3_IT_2"='#ffff8d',
"L4/5_IT_1"='#ff6d00', "L4/5_IT_2"='#ffd180',
"L5_IT_1"='#0091ea', "L5_IT_2"='#80d8ff',
"L6_IT_1"='#c51162', "L6_IT_2"='#ff80ab',
"L5_PT_1"='#304ffe', "L5_PT_2"='#8c9eff',
"L5_NP"='#8976ff',
"L6_CT_1"='#f05a9e', "L6_CT_2"="#d75ff6")
col_sample <- c('Adult1' = "#1e76b2", 'Adult2' = "#fd7e0c", 'Adult3' = "#2a9c67")
col_Glu_GABA <- c('Excitatory' = "#7570B3FF", 'Inhibitory' = "#E7298AFF",
'Non-neuron' = "#66A61EFF")
col_MainType <- c('Excitatory' = "#7570B3FF", 'Inhibitory' = "#E7298AFF",
'Astro' = "#d08fbe", 'Endo' = "#bb7967", 'Microglia' = "#00a7cf",
'Oligo' = "#5e45a6", 'OPC' = "#1470d6")
col_BC_label <- c(Barcoded = '#f8cb7f', Unbarcoded = '#90a5e1')
col_Barcode <- c(
'ITi-M1'='#1f77b4', 'ITi-M2'='#ff7f0e','ITc-M3'='#2ca02c','PTi'='#d62728',
'VIS-I'="#536dfe",'CP-I'="#448aff",'SSp-I'="#40c4ff",'AUD-I'="#18ffff",'RSP-I'="#84ffff",
'ACB-I'="#ff6e40",'BLA-I'="#ffab40",'ENTl-I'="#ffd740",'AId-I'="#ffff00",'ECT-I'="#ffff8d",
'CP-C'="#00bfa5",'PL-C'="#00c853",'RSP-C'="#64dd17",
'ACB-C'="#a7ffeb",'BLA-C'="#b9f6ca",'ENTl-C'="#ccff90",'AId-C'="#b2ff59",'ECT-C'="#69f0ae",
'MD-I'="#ff5252",'LHA-I'="#ff4081",'SC-I'="#e040fb",'DR-I'="#ff8a80",'RE-I'="#ff80ab",'VTA-I'="#ea80fc",
'none'="lightgray")
col_BC_num <- c('#5e4fa2','#3288bd','#66c2a5','#abdda4','#e6f598','#fee08b','#fdae61',
'#f46d43','#d53e4f','#9e0142')
col_Proj_module <- c('ITi-M1'='#1f77b4', 'ITi-M2'='#ff7f0e','ITc-M3'='#2ca02c','PTi'='#d62728')
col_Proj_subtype <- c(
"1"="#304ffe","14"="#3d5afe","17"="#536dfe","22"="#8c9eff","23"="#2962ff","25"="#2979ff",
"26"="#448aff","27"="#82b1ff","28"="#80d8ff","29"="#0091ea","31"="#00b0ff",
"7"="#dd2c00","8"="#ff3d00","9"="#ff6e40","10"="#ff9e80","15"="#ff6d00","16"="#ff9100",
"18"="#ffab40","19"="#ffd180","20"="#ffab00","21"="#ffc400",
"2"="#00c853","3"="#00e676","11"="#69f0ae","12"="#b9f6ca","13"="#64dd17","24"="#76ff03",
"30"="#b2ff59","32"="#ccff90","33"="#aeea00",
"4"="#d50000","5"="#ff8a80","6"="#f50057")
col_Proj_ITPT <- c('IT'='#1f77b4', 'PT'='#d62728')
col_D_V <- c('Dorsal'='#1f77b4', 'Ventral'='#ff7f0e')
col_subtype_target <- c("L2/3_IT_1"='#ffd600', "L2/3_IT_2"='#ffff8d',
"L4/5_IT_1"='#ff6d00', "L4/5_IT_2"='#ffd180',
"L5_IT_1"='#0091ea', "L5_IT_2"='#80d8ff',
"L6_IT_1"='#c51162', "L6_IT_2"='#ff80ab',
"L5_PT_1"='#304ffe', "L5_PT_2"='#8c9eff',
"L5_NP"='#8976ff',
"L6_CT_1"='#f05a9e', "L6_CT_2"="#d75ff6",
'ITi-M1'='#1f77b4', 'ITi-M2'='#ff7f0e','ITc-M3'='#2ca02c','PTi'='#d62728',
'VIS-I'="#536dfe",'CP-I'="#448aff",'SSp-I'="#40c4ff",'AUD-I'="#18ffff",'RSP-I'="#84ffff",
'ACB-I'="#ff6e40",'BLA-I'="#ffab40",'ENTl-I'="#ffd740",'AId-I'="#ffff00",'ECT-I'="#ffff8d",
'CP-C'="#00bfa5",'PL-C'="#00c853",'RSP-C'="#64dd17",
'ACB-C'="#a7ffeb",'BLA-C'="#b9f6ca",'ENTl-C'="#ccff90",'AId-C'="#b2ff59",'ECT-C'="#69f0ae",
'MD-I'="#ff5252",'LHA-I'="#ff4081",'SC-I'="#e040fb",'DR-I'="#ff8a80",'RE-I'="#ff80ab",'VTA-I'="#ea80fc",
'none'="lightgray") |