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882be26
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Parent(s):
3e2cb2f
feat: push observations functions for multi-file handling
Browse files- current implementation is to open the HF handle once, then prepare and
push each observation individually. Could check docs about pushing
multiple observations in one transaction.
- At present the `api.upload_file` call is commented out, just get
log/visual info about the actions
- src/hf_push_observations.py +72 -5
- src/main.py +6 -0
src/hf_push_observations.py
CHANGED
@@ -1,15 +1,83 @@
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import streamlit as st
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from huggingface_hub import HfApi
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import json
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import tempfile
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import logging
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# get a global var for logger accessor in this module
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LOG_LEVEL = logging.DEBUG
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g_logger = logging.getLogger(__name__)
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g_logger.setLevel(LOG_LEVEL)
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def push_observations(tab_log:DeltaGenerator=None):
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"""
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Push the observations to the Hugging Face dataset
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@@ -30,7 +98,6 @@ def push_observations(tab_log:DeltaGenerator=None):
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tab_log.info(f"Uploading observations: {metadata_str}")
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# get huggingface api
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import os
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token = os.environ.get("HF_TOKEN", None)
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api = HfApi(token=token)
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@@ -53,4 +120,4 @@ def push_observations(tab_log:DeltaGenerator=None):
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# msg = f"observation attempted tx to repo happy walrus: {rv}"
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g_logger.info(msg)
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st.info(msg)
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-
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import os
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import json
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import tempfile
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import logging
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from streamlit.delta_generator import DeltaGenerator
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import streamlit as st
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from huggingface_hub import HfApi, CommitInfo
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# get a global var for logger accessor in this module
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LOG_LEVEL = logging.DEBUG
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g_logger = logging.getLogger(__name__)
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g_logger.setLevel(LOG_LEVEL)
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def push_observation(image_hash:str, api:HfApi) -> CommitInfo:
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'''
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push one observation to the Hugging Face dataset
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'''
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# get the observation
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observation = st.session_state.public_observations.get(image_hash)
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if observation is None:
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msg = f"Could not find observation with hash {image_hash}"
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g_logger.error(msg)
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st.error(msg)
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return None
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# convert to json
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metadata_str = json.dumps(observation) # doesn't work yet, TODO
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st.toast(f"Uploading observation: {metadata_str}", icon="🦭")
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tab_log = st.session_state.tab_log
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if tab_log is not None:
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tab_log.info(f"Uploading observation: {metadata_str}")
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# write to temp file so we can send it (why is this not using context mgr?)
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f = tempfile.NamedTemporaryFile(mode="w", suffix=".json", delete=False)
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f.write(metadata_str)
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f.close()
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st.info(f"temp file: {f.name} with metadata written...")
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# observation['author_email']
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# observation['image_md5']
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path_in_repo = f"metadata/{observation['author_email']}/{observation['image_md5']}.json"
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msg = f"fname: {f.name} | path: {path_in_repo}"
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print(msg)
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st.warning(msg)
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rv = None # temp don't send anything
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# rv = api.upload_file(
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# path_or_fileobj=f.name,
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# path_in_repo=path_in_repo,
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# repo_id="Saving-Willy/temp_dataset",
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# repo_type="dataset",
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# )
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# print(rv)
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# msg = f"observation attempted tx to repo happy walrus: {rv}"
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g_logger.info(msg)
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st.info(msg)
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return rv
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def push_all_observations():
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'''
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open an API connection to Hugging Face, and push all observation one by one
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'''
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# get huggingface api
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token = os.environ.get("HF_TOKEN", None)
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api = HfApi(token=token)
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# iterate over the list of observations
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for hash in st.session_state.public_observations.keys():
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rv = push_observation(hash, api)
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def push_observations(tab_log:DeltaGenerator=None):
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"""
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Push the observations to the Hugging Face dataset
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tab_log.info(f"Uploading observations: {metadata_str}")
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# get huggingface api
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token = os.environ.get("HF_TOKEN", None)
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api = HfApi(token=token)
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# msg = f"observation attempted tx to repo happy walrus: {rv}"
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g_logger.info(msg)
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st.info(msg)
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src/main.py
CHANGED
@@ -24,6 +24,9 @@ from maps.obs_map import present_obs_map
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from utils.st_logs import setup_logging, parse_log_buffer
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from utils.workflow_state import WorkflowFSM, FSM_STATES
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from utils.workflow_ui import refresh_progress, init_workflow_viz
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#from classifier.classifier_image import cetacean_classify
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from classifier.classifier_image import cetacean_just_classify, cetacean_show_results_and_review, cetacean_show_results
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@@ -287,6 +290,7 @@ def main() -> None:
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if st.button("mock: manual validation done."):
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st.session_state.workflow_fsm.complete_current_state()
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# -> manual_inspection_completed
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cetacean_show_results_and_review()
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if st.button("(nooop) Upload observation to THE INTERNET!"):
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st.session_state.workflow_fsm.complete_current_state()
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# -> data_uploaded
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from utils.st_logs import setup_logging, parse_log_buffer
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from utils.workflow_state import WorkflowFSM, FSM_STATES
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from utils.workflow_ui import refresh_progress, init_workflow_viz
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from hf_push_observations import push_all_observations
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#from classifier.classifier_image import cetacean_classify
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from classifier.classifier_image import cetacean_just_classify, cetacean_show_results_and_review, cetacean_show_results
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if st.button("mock: manual validation done."):
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st.session_state.workflow_fsm.complete_current_state()
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# -> manual_inspection_completed
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st.rerun()
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cetacean_show_results_and_review()
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if st.button("(nooop) Upload observation to THE INTERNET!"):
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# let this go through to the push_all func, since it just reports to log for now.
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push_all_observations()
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st.session_state.workflow_fsm.complete_current_state()
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# -> data_uploaded
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