# coding: utf-8 __author__ = 'ZFTurbo: https://kaggle.com/zfturbo' import warnings import numpy as np from numba import jit @jit(nopython=True) def bb_intersection_over_union_3d(A, B) -> float: xA = max(A[0], B[0]) yA = max(A[1], B[1]) zA = max(A[2], B[2]) xB = min(A[3], B[3]) yB = min(A[4], B[4]) zB = min(A[5], B[5]) interVol = max(0, xB - xA) * max(0, yB - yA) * max(0, zB - zA) if interVol == 0: return 0.0 # compute the volume of both the prediction and ground-truth rectangular boxes boxAVol = (A[3] - A[0]) * (A[4] - A[1]) * (A[5] - A[2]) boxBVol = (B[3] - B[0]) * (B[4] - B[1]) * (B[5] - B[2]) iou = interVol / float(boxAVol + boxBVol - interVol) return iou def prefilter_boxes(boxes, scores, labels, weights, thr): # Create dict with boxes stored by its label new_boxes = dict() for t in range(len(boxes)): if len(boxes[t]) != len(scores[t]): print('Error. Length of boxes arrays not equal to length of scores array: {} != {}'.format(len(boxes[t]), len(scores[t]))) exit() if len(boxes[t]) != len(labels[t]): print('Error. Length of boxes arrays not equal to length of labels array: {} != {}'.format(len(boxes[t]), len(labels[t]))) exit() for j in range(len(boxes[t])): score = scores[t][j] if score < thr: continue label = int(labels[t][j]) box_part = boxes[t][j] x1 = float(box_part[0]) y1 = float(box_part[1]) z1 = float(box_part[2]) x2 = float(box_part[3]) y2 = float(box_part[4]) z2 = float(box_part[5]) # Box data checks if x2 < x1: warnings.warn('X2 < X1 value in box. Swap them.') x1, x2 = x2, x1 if y2 < y1: warnings.warn('Y2 < Y1 value in box. Swap them.') y1, y2 = y2, y1 if z2 < z1: warnings.warn('Z2 < Z1 value in box. Swap them.') z1, z2 = z2, z1 if x1 < 0: warnings.warn('X1 < 0 in box. Set it to 0.') x1 = 0 if x1 > 1: warnings.warn('X1 > 1 in box. Set it to 1. Check that you normalize boxes in [0, 1] range.') x1 = 1 if x2 < 0: warnings.warn('X2 < 0 in box. Set it to 0.') x2 = 0 if x2 > 1: warnings.warn('X2 > 1 in box. Set it to 1. Check that you normalize boxes in [0, 1] range.') x2 = 1 if y1 < 0: warnings.warn('Y1 < 0 in box. Set it to 0.') y1 = 0 if y1 > 1: warnings.warn('Y1 > 1 in box. Set it to 1. Check that you normalize boxes in [0, 1] range.') y1 = 1 if y2 < 0: warnings.warn('Y2 < 0 in box. Set it to 0.') y2 = 0 if y2 > 1: warnings.warn('Y2 > 1 in box. Set it to 1. Check that you normalize boxes in [0, 1] range.') y2 = 1 if z1 < 0: warnings.warn('Z1 < 0 in box. Set it to 0.') z1 = 0 if z1 > 1: warnings.warn('Z1 > 1 in box. Set it to 1. Check that you normalize boxes in [0, 1] range.') z1 = 1 if z2 < 0: warnings.warn('Z2 < 0 in box. Set it to 0.') z2 = 0 if z2 > 1: warnings.warn('Z2 > 1 in box. Set it to 1. Check that you normalize boxes in [0, 1] range.') z2 = 1 if (x2 - x1) * (y2 - y1) * (z2 - z1) == 0.0: warnings.warn("Zero volume box skipped: {}.".format(box_part)) continue b = [int(label), float(score) * weights[t], x1, y1, z1, x2, y2, z2] if label not in new_boxes: new_boxes[label] = [] new_boxes[label].append(b) # Sort each list in dict by score and transform it to numpy array for k in new_boxes: current_boxes = np.array(new_boxes[k]) new_boxes[k] = current_boxes[current_boxes[:, 1].argsort()[::-1]] return new_boxes def get_weighted_box(boxes, conf_type='avg'): """ Create weighted box for set of boxes :param boxes: set of boxes to fuse :param conf_type: type of confidence one of 'avg' or 'max' :return: weighted box """ box = np.zeros(8, dtype=np.float32) conf = 0 conf_list = [] for b in boxes: box[2:] += (b[1] * b[2:]) conf += b[1] conf_list.append(b[1]) box[0] = boxes[0][0] if conf_type == 'avg': box[1] = conf / len(boxes) elif conf_type == 'max': box[1] = np.array(conf_list).max() box[2:] /= conf return box def find_matching_box(boxes_list, new_box, match_iou): best_iou = match_iou best_index = -1 for i in range(len(boxes_list)): box = boxes_list[i] if box[0] != new_box[0]: continue iou = bb_intersection_over_union_3d(box[2:], new_box[2:]) if iou > best_iou: best_index = i best_iou = iou return best_index, best_iou def weighted_boxes_fusion_3d(boxes_list, scores_list, labels_list, weights=None, iou_thr=0.55, skip_box_thr=0.0, conf_type='avg', allows_overflow=False): ''' :param boxes_list: list of boxes predictions from each model, each box is 6 numbers. It has 3 dimensions (models_number, model_preds, 6) Order of boxes: x1, y1, z1, x2, y2 z2. We expect float normalized coordinates [0; 1] :param scores_list: list of scores for each model :param labels_list: list of labels for each model :param weights: list of weights for each model. Default: None, which means weight == 1 for each model :param iou_thr: IoU value for boxes to be a match :param skip_box_thr: exclude boxes with score lower than this variable :param conf_type: how to calculate confidence in weighted boxes. 'avg': average value, 'max': maximum value :param allows_overflow: false if we want confidence score not exceed 1.0 :return: boxes: boxes coordinates (Order of boxes: x1, y1, z1, x2, y2, z2). :return: scores: confidence scores :return: labels: boxes labels ''' if weights is None: weights = np.ones(len(boxes_list)) if len(weights) != len(boxes_list): print('Warning: incorrect number of weights {}. Must be: {}. Set weights equal to 1.'.format(len(weights), len(boxes_list))) weights = np.ones(len(boxes_list)) weights = np.array(weights) if conf_type not in ['avg', 'max']: print('Error. Unknown conf_type: {}. Must be "avg" or "max". Use "avg"'.format(conf_type)) conf_type = 'avg' filtered_boxes = prefilter_boxes(boxes_list, scores_list, labels_list, weights, skip_box_thr) if len(filtered_boxes) == 0: return np.zeros((0, 6)), np.zeros((0,)), np.zeros((0,)) overall_boxes = [] for label in filtered_boxes: boxes = filtered_boxes[label] new_boxes = [] weighted_boxes = [] # Clusterize boxes for j in range(0, len(boxes)): index, best_iou = find_matching_box(weighted_boxes, boxes[j], iou_thr) if index != -1: new_boxes[index].append(boxes[j]) weighted_boxes[index] = get_weighted_box(new_boxes[index], conf_type) else: new_boxes.append([boxes[j].copy()]) weighted_boxes.append(boxes[j].copy()) # Rescale confidence based on number of models and boxes for i in range(len(new_boxes)): if not allows_overflow: weighted_boxes[i][1] = weighted_boxes[i][1] * min(weights.sum(), len(new_boxes[i])) / weights.sum() else: weighted_boxes[i][1] = weighted_boxes[i][1] * len(new_boxes[i]) / weights.sum() overall_boxes.append(np.array(weighted_boxes)) overall_boxes = np.concatenate(overall_boxes, axis=0) overall_boxes = overall_boxes[overall_boxes[:, 1].argsort()[::-1]] boxes = overall_boxes[:, 2:] scores = overall_boxes[:, 1] labels = overall_boxes[:, 0] return boxes, scores, labels