Plsek commited on
Commit
7a4c7bf
·
1 Parent(s): 00e1b14

Update app.py

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Files changed (1) hide show
  1. app.py +3 -3
app.py CHANGED
@@ -96,7 +96,7 @@ def cut_n_predict(data, wcs, scale):
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  # Define function to decompose prediction into individual cavities
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  @st.cache
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- def decompose_cavity(pred, th2=0.7, amin=10):
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  X, Y = pred.nonzero()
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  data = np.array([X,Y]).reshape(2, -1)
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@@ -113,8 +113,8 @@ def decompose_cavity(pred, th2=0.7, amin=10):
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  xi, yi = X[b], Y[b]
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  img[xi, yi] = pred[xi, yi]
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- # Thresholding #2
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- if not (img > th2).any(): continue
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  # Minimal area
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  if np.sum(img) <= amin: continue
 
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  # Define function to decompose prediction into individual cavities
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  @st.cache
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+ def decompose_cavity(pred, th2=0.7, amin=6):
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  X, Y = pred.nonzero()
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  data = np.array([X,Y]).reshape(2, -1)
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  xi, yi = X[b], Y[b]
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  img[xi, yi] = pred[xi, yi]
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+ # # Thresholding #2
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+ # if not (img > th2).any(): continue
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  # Minimal area
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  if np.sum(img) <= amin: continue