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Update Background_Substraction.py
Browse files- Background_Substraction.py +1 -22
Background_Substraction.py
CHANGED
@@ -1045,25 +1045,4 @@ app2 = pn.template.GoldenTemplate(
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# In[66]:
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app2.servable()
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# ## II.8. SAVE
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# In[67]:
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# Save the data by Sample_ID
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# Check for the existence of the output file first
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for sample in ls_samples:
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sample_id = sample.split('_')[0]
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filename = os.path.join(output_data_dir, sample_id + "_" + step_suffix + ".csv")
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if os.path.exists(filename):
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print("File by name "+filename+" already exists.")
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else:
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sample_id_csv = sample_id + '.csv'
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df_save = df.loc[df['Sample_ID'] == sample_id_csv, :]
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#print(df_save)
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filename = os.path.join(output_data_dir, sample_id + "_" + step_suffix + ".csv")
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df_save.to_csv(filename, index=True, index_label='ID') # Set index parameter to True to retain the index column
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print("File " + filename + " was created!")
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# In[66]:
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app2.servable()
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