Dockerfile

FROM python:3.11

WORKDIR /code

COPY ./requirements.txt /code/requirements.txt
RUN python3 -m pip install --no-cache-dir --upgrade pip
RUN python3 -m pip install --no-cache-dir --upgrade -r /code/requirements.txt

COPY . .

EXPOSE 7860

CMD ["panel", "serve", "/code/Step5_Marker_Threshold_Classification.py","/code/Step3_Background_Substraction.py",  "/code/Step2_Quality_Control.py",  "/code/Step1_Setup.py", "/code/Step4_ZScore.py", "--address", "0.0.0.0", "--port", "7860",  "--allow-websocket-origin", "*", "--index", "/code/index.html"]

RUN mkdir /.cache
RUN chmod 777 /.cache
RUN chmod -R 777 /code
RUN chmod -R 777 ./
RUN mkdir .chroma
RUN chmod 777 .chroma