app.py

import panel as pn
# Initialize the Panel extension (necessary for notebooks)
pn.extension()

# Function to create a button with a link
def create_link_button(label, url):
    button = pn.widgets.Button(name=label, button_type='primary')
    button.js_on_click(code=f"window.open('{url}', '_blank')")
    return button

# Create buttons linking to the Jupyter notebooks
notebook_buttons = [
    create_link_button("Setup", "http://localhost:1001"),
    create_link_button("Quality_Control", "http://localhost:1002"),
    create_link_button("Background-Subtraction", "http://localhost:1003"),
    create_link_button("Z-Score Computation", "http://localhost:1004"),
    create_link_button("Marker Threshold", "http://localhost:1005"),
    create_link_button("Classification", "http://localhost:1006"),
]

# Arrange the buttons into columns
columns = [pn.Column(button, width=200) for button in notebook_buttons]

# Create the MaterialTemplate with the columns in the main area
app = pn.template.MaterialTemplate(
    title="Analysis",
    site="Cyc-IF",
    sidebar=[
        pn.pane.Markdown("# README"),
        pn.pane.Markdown("This space provides an overview of the platform's usage, highlights its features, and includes a navigation guide."),
    ],
    main=pn.Row(*columns),
)