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82781a6
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Parent(s):
2a07f09
Update code/alphafold_featureVector.py
Browse files
code/alphafold_featureVector.py
CHANGED
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@@ -374,7 +374,7 @@ def alphafold(input_set, mode, impute):
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st.write('-----')
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st.write('')
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mod = 1
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name = '
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pdb_path = hf_hub_download(repo_id="HuBioDataLab/AlphafoldStructures", filename=f"AF-{name}-F{mod}-model_v4.pdb.gz",repo_type = 'dataset')
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st.write('PATH')
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st.write(pdb_path)
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@@ -390,7 +390,7 @@ def alphafold(input_set, mode, impute):
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st.write('HERE1')
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st.write('uniprot', uniprotID)
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#pdb_path = hf_hub_download(repo_id="HuBioDataLab/AlphafoldStructures", filename=f"AF-{uniprotID}-F{mod}-model_v4.pdb.gz",repo_type = 'dataset')
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pdb_path = hf_hub_download(repo_id="HuBioDataLab/AlphafoldStructures", filename=f"AF-
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with gzip.open(pdb_path, mode="rt") as f:
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st.write('-----')
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st.write('')
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mod = 1
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name = 'Q8N468'
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pdb_path = hf_hub_download(repo_id="HuBioDataLab/AlphafoldStructures", filename=f"AF-{name}-F{mod}-model_v4.pdb.gz",repo_type = 'dataset')
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st.write('PATH')
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st.write(pdb_path)
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st.write('HERE1')
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st.write('uniprot', uniprotID)
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#pdb_path = hf_hub_download(repo_id="HuBioDataLab/AlphafoldStructures", filename=f"AF-{uniprotID}-F{mod}-model_v4.pdb.gz",repo_type = 'dataset')
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pdb_path = hf_hub_download(repo_id="HuBioDataLab/AlphafoldStructures", filename=f"AF-Q8N468-F1-model_v4.pdb.gz",repo_type = 'dataset')
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with gzip.open(pdb_path, mode="rt") as f:
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