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Mar 14

MANTIS: Interleaved Multi-Image Instruction Tuning

The recent years have witnessed a great array of large multimodal models (LMMs) to effectively solve single-image vision language tasks. However, their abilities to solve multi-image visual language tasks is yet to be improved. The existing multi-image LMMs (e.g. OpenFlamingo, Emu, Idefics, etc) mostly gain their multi-image ability through pre-training on hundreds of millions of noisy interleaved image-text data from web, which is neither efficient nor effective. In this paper, we aim at building strong multi-image LMMs via instruction tuning with academic-level resources. Therefore, we meticulously construct Mantis-Instruct containing 721K instances from 14 multi-image datasets. We design Mantis-Instruct to cover different multi-image skills like co-reference, reasoning, comparing, temporal understanding. We combine Mantis-Instruct with several single-image visual-language datasets to train our model Mantis to handle any interleaved image-text inputs. We evaluate the trained Mantis on five multi-image benchmarks and eight single-image benchmarks. Though only requiring academic-level resources (i.e. 36 hours on 16xA100-40G), Mantis-8B can achieve state-of-the-art performance on all the multi-image benchmarks and beats the existing best multi-image LMM Idefics2-8B by an average of 9 absolute points. We observe that Mantis performs equivalently well on the held-in and held-out evaluation benchmarks. We further evaluate Mantis on single-image benchmarks and demonstrate that Mantis can maintain a strong single-image performance on par with CogVLM and Emu2. Our results are particularly encouraging as it shows that low-cost instruction tuning is indeed much more effective than intensive pre-training in terms of building multi-image LMMs.

VisCon-100K: Leveraging Contextual Web Data for Fine-tuning Vision Language Models

Vision-language models (VLMs) excel in various visual benchmarks but are often constrained by the lack of high-quality visual fine-tuning data. To address this challenge, we introduce VisCon-100K, a novel dataset derived from interleaved image-text web documents. Our approach transforms 45K web documents from the OBELICS dataset into 100K image conversation samples. We utilize GPT-4V to generate image-contextual captions and OpenChat 3.5 model to convert these captions into diverse free-form and multiple-choice question-answer pairs. Integrating this dataset for fine-tuning considerably enhances VLM performance across multiple benchmarks. Unlike methods that focus solely on fine-grained visual content, our approach leverages accompanying web context, yielding superior results. We also discover that a `leaky modality mix,' where conversation samples contain questions answerable from both the image and its contextual caption, outperforms non-leaky combinations of captions and Q\&A pairs. VisCon-100k dataset shows strong performance with two popular VLM approaches: text-only large language model (LLM) aligned with a vision encoder using image captions data (ShareGPT4V-7b) and multimodally pretrained LLM (IDEFICS2-8b) using interleaved image-text data. In addition to releasing the VisCon-100K dataset, we provide a contextual captioner trained on this dataset, facilitating scalable fine-tuning data generation for future research and open-source applications. Using the same pipeline, but substituting our trained contextual captioner for GPT-4V, we also release the larger VisCon-1M dataset.

Bioformer: an efficient transformer language model for biomedical text mining

Pretrained language models such as Bidirectional Encoder Representations from Transformers (BERT) have achieved state-of-the-art performance in natural language processing (NLP) tasks. Recently, BERT has been adapted to the biomedical domain. Despite the effectiveness, these models have hundreds of millions of parameters and are computationally expensive when applied to large-scale NLP applications. We hypothesized that the number of parameters of the original BERT can be dramatically reduced with minor impact on performance. In this study, we present Bioformer, a compact BERT model for biomedical text mining. We pretrained two Bioformer models (named Bioformer8L and Bioformer16L) which reduced the model size by 60% compared to BERTBase. Bioformer uses a biomedical vocabulary and was pre-trained from scratch on PubMed abstracts and PubMed Central full-text articles. We thoroughly evaluated the performance of Bioformer as well as existing biomedical BERT models including BioBERT and PubMedBERT on 15 benchmark datasets of four different biomedical NLP tasks: named entity recognition, relation extraction, question answering and document classification. The results show that with 60% fewer parameters, Bioformer16L is only 0.1% less accurate than PubMedBERT while Bioformer8L is 0.9% less accurate than PubMedBERT. Both Bioformer16L and Bioformer8L outperformed BioBERTBase-v1.1. In addition, Bioformer16L and Bioformer8L are 2-3 fold as fast as PubMedBERT/BioBERTBase-v1.1. Bioformer has been successfully deployed to PubTator Central providing gene annotations over 35 million PubMed abstracts and 5 million PubMed Central full-text articles. We make Bioformer publicly available via https://github.com/WGLab/bioformer, including pre-trained models, datasets, and instructions for downstream use.