BioM3 / Stage3_source /helper_funcs.py
Niksa Praljak
Add scripts for ProteoScribe Sampling
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from pynvml import *
"""
To track memory allocation, let's take advantage of the nvidia-ml-py3 package and GPU memory allocation from python.
ref: https://huggingface.co/docs/transformers/v4.20.1/en/perf_train_gpu_one
"""
def print_gpu_initialization():
nvmlInit()
handle = nvmlDeviceGetHandleByIndex(0)
info = nvmlDeviceGetMemoryInfo(handle)
print(f"GPU memory occupied: {info.used//1024**2} MB.")
return info.used // 1024**2
def print_summary(result):
print(f"Time: {result.metrics['train_runtime']:.2f}")
print(f"Samples/second: {result.metrics['train_samples_per_second']:.2f}")
print_gpu_utilization()