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---
tags:
- generated_from_trainer
model-index:
- name: prot_bert-finetuned-smiles-bindingDB
  results: []
---

<!-- This model card has been generated automatically according to the information the Trainer had access to. You
should probably proofread and complete it, then remove this comment. -->

# prot_bert-finetuned-smiles-bindingDB

This model is a fine-tuned version of [Rostlab/prot_bert](https://huggingface.co/Rostlab/prot_bert) on an unknown dataset.
It achieves the following results on the evaluation set:
- Loss: 1.2250

## Model description

More information needed

## Intended uses & limitations

More information needed

## Training and evaluation data

More information needed

## Training procedure

### Training hyperparameters

The following hyperparameters were used during training:
- learning_rate: 1e-06
- train_batch_size: 1
- eval_batch_size: 1
- seed: 42
- optimizer: Adam with betas=(0.9,0.999) and epsilon=1e-08
- lr_scheduler_type: linear
- num_epochs: 3
- mixed_precision_training: Native AMP

### Training results

| Training Loss | Epoch | Step  | Validation Loss |
|:-------------:|:-----:|:-----:|:---------------:|
| 1.6942        | 1.0   | 10000 | 1.4153          |
| 1.3261        | 2.0   | 20000 | 1.2679          |
| 1.2467        | 3.0   | 30000 | 1.2300          |


### Framework versions

- Transformers 4.18.0
- Pytorch 1.11.0+cu113
- Datasets 2.1.0
- Tokenizers 0.12.1