Program Cost. The average cost of a masterâs degree is between $30,000 and $120,000. The cost varies on the degree program and the school providing the degree.The average cost for an MBA degree is $40,000 per year or $80,000 for two years. Typically, a student can pay less if they pay in-state tuition at a public university.rogram Cost. The average cost of a masterâs degree is between $30,000 and $120,000. The cost varies on the degree program and the school providing the degree.