add: ncRNA DMS datasets

ncrna_dms/andreasson_2020_dms_rna.csv

@@ -0,0 +1,11 @@
+species,id,mutated_sequence,DMS_score
+glmS,glmS_WT,ATAAAAGCGCCAGAACTACAGAAATGTAGTTGACGAGGAGGAGGTTTATCGAATTTTCGGCGGATGCCTCCAAA,1
+glmS,glmS_C58G,ATAAAAGCGCCAGAACTACAGAAATGTAGTTGACGAGGAGGAGGTTTATCGAATTTTGGGCGGATGCCTCCAAA,0.002312553589856723
+glmS,glmS_C10A,ATAAAAGCGACAGAACTACAGAAATGTAGTTGACGAGGAGGAGGTTTATCGAATTTTCGGCGGATGCCTCCAAA,0.0001210566025132375
+glmS,glmS_C11G,ATAAAAGCGCGAGAACTACAGAAATGTAGTTGACGAGGAGGAGGTTTATCGAATTTTCGGCGGATGCCTCCAAA,0.0001156245754773871
+glmS,glmS_G35T,ATAAAAGCGCCAGAACTACAGAAATGTAGTTGACTAGGAGGAGGTTTATCGAATTTTCGGCGGATGCCTCCAAA,0.000015520077245286858
+glmS,glmS_A64G,ATAAAAGCGCCAGAACTACAGAAATGTAGTTGACGAGGAGGAGGTTTATCGAATTTTCGGCGGGTGCCTCCAAA,0.639750465714838
+glmS,glmS_C11A,ATAAAAGCGCAAGAACTACAGAAATGTAGTTGACGAGGAGGAGGTTTATCGAATTTTCGGCGGATGCCTCCAAA,0.0036567785202255084
+glmS,glmS_A53T,ATAAAAGCGCCAGAACTACAGAAATGTAGTTGACGAGGAGGAGGTTTATCGATTTTTCGGCGGATGCCTCCAAA,0.65220978196635
+glmS,glmS_G7C,ATAAAACCGCCAGAACTACAGAAATGTAGTTGACGAGGAGGAGGTTTATCGAATTTTCGGCGGATGCCTCCAAA,0.000015520077245286858
+glmS,glmS_A15T,ATAAAAGCGCCAGATCTACAGAAATGTAGTTGACGAGGAGGAGGTTTATCGAATTTTCGGCGGATGCCTCCAAA,0.1314506620857193

ncrna_dms/zhang_2009_dms_rna.csv

@@ -0,0 +1,17 @@
+species,id,mutated_sequence,DMS_score
+eschericia_coli,rRNA_5S_WT,UGCCUGGCGACCAUAGCGAUUUGGACCCACCUGAUUCCAUGCCGAACUCAGUAGUGAAACGAAUUAGCGCCGAUGGUAGUGUGGGGUUUCCCCAUGUGAGAGUAGGACAUCGCCAGGCAU,0
+eschericia_coli,rRNA_5S_U35C,UGCCUGGCGACCAUAGCGAUUUGGACCCACCUGACUCCAUGCCGAACUCAGUAGUGAAACGAAUUAGCGCCGAUGGUAGUGUGGGGUUUCCCCAUGUGAGAGUAGGACAUCGCCAGGCAU,0.041
+eschericia_coli,rRNA_5S_U36C,UGCCUGGCGACCAUAGCGAUUUGGACCCACCUGAUCCCAUGCCGAACUCAGUAGUGAAACGAAUUAGCGCCGAUGGUAGUGUGGGGUUUCCCCAUGUGAGAGUAGGACAUCGCCAGGCAU,0.019
+eschericia_coli,rRNA_5S_G41U,UGCCUGGCGACCAUAGCGAUUUGGACCCACCUGAUUCCAUUCCGAACUCAGUAGUGAAACGAAUUAGCGCCGAUGGUAGUGUGGGGUUUCCCCAUGUGAGAGUAGGACAUCGCCAGGCAU,
+eschericia_coli,rRNA_5S_U52A,UGCCUGGCGACCAUAGCGAUUUGGACCCACCUGAUUCCAUGCCGAACUCAGAAGUGAAACGAAUUAGCGCCGAUGGUAGUGUGGGGUUUCCCCAUGUGAGAGUAGGACAUCGCCAGGCAU,
+eschericia_coli,rRNA_5S_A62U,UGCCUGGCGACCAUAGCGAUUUGGACCCACCUGAUUCCAUGCCGAACUCAGUAGUGAAACGUAUUAGCGCCGAUGGUAGUGUGGGGUUUCCCCAUGUGAGAGUAGGACAUCGCCAGGCAU,0.069
+eschericia_coli,rRNA_5S_G44C,UGCCUGGCGACCAUAGCGAUUUGGACCCACCUGAUUCCAUGCCCAACUCAGUAGUGAAACGAAUUAGCGCCGAUGGUAGUGUGGGGUUUCCCCAUGUGAGAGUAGGACAUCGCCAGGCAU,-0.208
+eschericia_coli,rRNA_5S_A53G,UGCCUGGCGACCAUAGCGAUUUGGACCCACCUGAUUCCAUGCCGAACUCAGUGGUGAAACGAAUUAGCGCCGAUGGUAGUGUGGGGUUUCCCCAUGUGAGAGUAGGACAUCGCCAGGCAU,-0.029
+eschericia_coli,rRNA_5S_U55A,UGCCUGGCGACCAUAGCGAUUUGGACCCACCUGAUUCCAUGCCGAACUCAGUAGAGAAACGAAUUAGCGCCGAUGGUAGUGUGGGGUUUCCCCAUGUGAGAGUAGGACAUCGCCAGGCAU,-0.114
+eschericia_coli,rRNA_5S_A58C,UGCCUGGCGACCAUAGCGAUUUGGACCCACCUGAUUCCAUGCCGAACUCAGUAGUGACACGAAUUAGCGCCGAUGGUAGUGUGGGGUUUCCCCAUGUGAGAGUAGGACAUCGCCAGGCAU,-0.038
+eschericia_coli,rRNA_5S_U64A,UGCCUGGCGACCAUAGCGAUUUGGACCCACCUGAUUCCAUGCCGAACUCAGUAGUGAAACGAAAUAGCGCCGAUGGUAGUGUGGGGUUUCCCCAUGUGAGAGUAGGACAUCGCCAGGCAU,0.047
+eschericia_coli,rRNA_5S_C17U,UGCCUGGCGACCAUAGUGAUUUGGACCCACCUGAUUCCAUGCCGAACUCAGUAGUGAAACGAAUUAGCGCCGAUGGUAGUGUGGGGUUUCCCCAUGUGAGAGUAGGACAUCGCCAGGCAU,0.062
+eschericia_coli,rRNA_5S_A19U,UGCCUGGCGACCAUAGCGUUUUGGACCCACCUGAUUCCAUGCCGAACUCAGUAGUGAAACGAAUUAGCGCCGAUGGUAGUGUGGGGUUUCCCCAUGUGAGAGUAGGACAUCGCCAGGCAU,0.021
+eschericia_coli,rRNA_5S_U21A,UGCCUGGCGACCAUAGCGAUAUGGACCCACCUGAUUCCAUGCCGAACUCAGUAGUGAAACGAAUUAGCGCCGAUGGUAGUGUGGGGUUUCCCCAUGUGAGAGUAGGACAUCGCCAGGCAU,-0.024
+eschericia_coli,rRNA_5S_G44U,UGCCUGGCGACCAUAGCGAUUUGGACCCACCUGAUUCCAUGCCUAACUCAGUAGUGAAACGAAUUAGCGCCGAUGGUAGUGUGGGGUUUCCCCAUGUGAGAGUAGGACAUCGCCAGGCAU,-0.099
+eschericia_coli,rRNA_5S_C70U,UGCCUGGCGACCAUAGCGAUUUGGACCCACCUGAUUCCAUGCCGAACUCAGUAGUGAAACGAAUUAGCGUCGAUGGUAGUGUGGGGUUUCCCCAUGUGAGAGUAGGACAUCGCCAGGCAU,0.045