Traceback (most recent call last):


 "/usr/bin/pip3", line 9, in <module>

from pip import main


 "/usr/lib/python3/dist-packages/pip/__init__.py", line 13, in <module>

from pip.exceptions import InstallationError, CommandError, PipError


 "/usr/lib/python3/dist-packages/pip/exceptions.py", line 6, in <module>

from pip._vendor.six import iteritems


 "/usr/lib/python3/dist-packages/pip/_vendor/__init__.py", line 75, in <module>

vendored("pkg_resources")


 "/usr/lib/python3/dist-packages/pip/_vendor/__init__.py", line 36, in vendored

__import__(modulename, globals(), locals(), level=0)


 "<frozen importlib._bootstrap>", line 969, in _find_and_load


 "<frozen importlib._bootstrap>", line 958, in _find_and_load_unlocked


 "<frozen importlib._bootstrap>", line 664, in _load_unlocked


 "<frozen importlib._bootstrap>", line 634, in _load_backward_compatible


 "/usr/share/python-wheels/pkg_resources-0.0.0-py2.py3-none-any.whl/pkg_resources/__init__.py", line 2927, in <module>


 "/usr/share/python-wheels/pkg_resources-0.0.0-py2.py3-none-any.whl/pkg_resources/__init__.py", line 2913, in _call_aside


 "/usr/share/python-wheels/pkg_resources-0.0.0-py2.py3-none-any.whl/pkg_resources/__init__.py", line 2952, in _initialize_master_working_set


 "/usr/share/python-wheels/pkg_resources-0.0.0-py2.py3-none-any.whl/pkg_resources/__init__.py", line 956, in subscribe


 "/usr/share/python-wheels/pkg_resources-0.0.0-py2.py3-none-any.whl/pkg_resources/__init__.py", line 2952, in <lambda>


 "/usr/share/python-wheels/pkg_resources-0.0.0-py2.py3-none-any.whl/pkg_resources/__init__.py", line 2515, in activate


 "/usr/share/python-wheels/pkg_resources-0.0.0-py2.py3-none-any.whl/pkg_resources/__init__.py", line 2097, in declare_namespace


 "/usr/share/python-wheels/pkg_resources-0.0.0-py2.py3-none-any.whl/pkg_resources/__init__.py", line 2047, in _handle_ns


 "/usr/share/python-wheels/pkg_resources-0.0.0-py2.py3-none-any.whl/pkg_resources/__init__.py", line 2066, in _rebuild_mod_path
AttributeError: '_NamespacePath' object has no attribute 'sort'

Traceback (most recent call last):


 "/home/gitlab-runner/builds/WgJTr25x/0/databiosphere/toil/src/toil/test/cwl/cwlTest.py", line 111, in test_run_s3

self.download('download_s3.json', self._tester)


 "/home/gitlab-runner/builds/WgJTr25x/0/databiosphere/toil/src/toil/test/cwl/cwlTest.py", line 99, in download

self._expected_download_output(self.outDir))


 "/home/gitlab-runner/builds/WgJTr25x/0/databiosphere/toil/src/toil/test/cwl/cwlTest.py", line 71, in _tester

cwltoil.main(main_args, stdout=st)


 "/home/gitlab-runner/builds/WgJTr25x/0/databiosphere/toil/src/toil/cwl/cwltoil.py", line 1254, in main

import_files(initialized_job_order)


 "/home/gitlab-runner/builds/WgJTr25x/0/databiosphere/toil/src/toil/cwl/cwltoil.py", line 1232, in import_files

skip_broken=True))


 "/home/gitlab-runner/builds/WgJTr25x/0/databiosphere/toil/venv/local/lib/python2.7/site-packages/cwltool/pathmapper.py", line 47, in adjust
Objs

visit_class(rec, ("
",), op)


 "/home/gitlab-runner/builds/WgJTr25x/0/databiosphere/toil/venv/local/lib/python2.7/site-packages/cwltool/utils.py", line 210, in visit_class

visit_class(rec[d], cls, op)


 "/home/gitlab-runner/builds/WgJTr25x/0/databiosphere/toil/venv/local/lib/python2.7/site-packages/cwltool/utils.py", line 208, in visit_class

op(rec)


 "/home/gitlab-runner/builds/WgJTr25x/0/databiosphere/toil/src/toil/cwl/cwltoil.py", line 365, in upload


uploadfunc, fileindex, existing, uf["location"])


 "/home/gitlab-runner/builds/WgJTr25x/0/databiosphere/toil/src/toil/cwl/cwltoil.py", line 337, in write_file

index[x] = "toilfs:" + writeFunc(rp)


 "/home/gitlab-runner/builds/WgJTr25x/0/databiosphere/toil/src/toil/common.py", line 953, in import


return self._jobStore.import
(srcUrl, shared
Name=shared
Name)


 "/home/gitlab-runner/builds/WgJTr25x/0/databiosphere/toil/src/toil/jobStores/abstractJobStore.py", line 299, in import


return self._import
(otherCls, srcUrl, shared
Name=shared
Name, hardlink=hardlink)


 "/home/gitlab-runner/builds/WgJTr25x/0/databiosphere/toil/src/toil/jobStores/fileJobStore.py", line 272, in _import


shared
Name=shared
Name)


 "/home/gitlab-runner/builds/WgJTr25x/0/databiosphere/toil/src/toil/jobStores/abstractJobStore.py", line 320, in _import


otherCls._readFromUrl(url, writable)


 "/home/gitlab-runner/builds/WgJTr25x/0/databiosphere/toil/src/toil/jobStores/aws/jobStore.py", line 435, in _readFromUrl

srcKey = cls._getKeyForUrl(url, existing=True)


 "/home/gitlab-runner/builds/WgJTr25x/0/databiosphere/toil/src/toil/jobStores/aws/jobStore.py", line 476, in _getKeyForUrl

with closing(boto.connect_s3()) as s3:


 "/home/gitlab-runner/builds/WgJTr25x/0/databiosphere/toil/venv/local/lib/python2.7/site-packages/boto/__init__.py", line 141, in connect_s3

return S3Connection(aws_access_key_id, aws_secret_access_key, **kwargs)


 "/home/gitlab-runner/builds/WgJTr25x/0/databiosphere/toil/venv/local/lib/python2.7/site-packages/boto/s3/connection.py", line 194, in __init__

validate_certs=validate_certs, profile_name=profile_name)


 "/home/gitlab-runner/builds/WgJTr25x/0/databiosphere/toil/venv/local/lib/python2.7/site-packages/boto/connection.py", line 555, in __init__

profile_name)


 "/home/gitlab-runner/builds/WgJTr25x/0/databiosphere/toil/src/toil/__init__.py", line 491, in __init__

profile_name=profile_name, **kwargs)


 "/home/gitlab-runner/builds/WgJTr25x/0/databiosphere/toil/venv/local/lib/python2.7/site-packages/boto/provider.py", line 201, in __init__

self.get_credentials(access_key, secret_key, security_token, profile_name)


 "/home/gitlab-runner/builds/WgJTr25x/0/databiosphere/toil/src/toil/__init__.py", line 503, in get_credentials

self._obtain_credentials_from_cache_or_boto3()


 "/home/gitlab-runner/builds/WgJTr25x/0/databiosphere/toil/src/toil/__init__.py", line 620, in _obtain_credentials_from_cache_or_boto3

self._obtain_credentials_from_boto3()


 "/home/gitlab-runner/builds/WgJTr25x/0/databiosphere/toil/src/toil/__init__.py", line 545, in _obtain_credentials_from_boto3

creds.get_frozen_credentials()
AttributeError: 'NoneType' object has no attribute 'get_frozen_credentials'
