Traceback (most recent call last):

 "/home/cosmos/library/python2.7/lib/python2.7/site-packages/nose-1.2.1-py2.7.egg/nose/case.py", line 197, in runTest
self.test(*self.arg)

 "/home/cosmos/library/python2.7/lib/python2.7/site-packages/sklearn/cluster/bicluster/tests/test_utils.py", line 43, in test_get_submatrix
assert_true(np.all(X != -1))

 "/home/cosmos/library/python2.7/lib/python2.7/unittest/case.py", line 418, in assertTrue
if not expr:

 "/home/cosmos/library/python2.7/lib/python2.7/site-packages/scipy/sparse/base.py", line 183, in __bool__
raise ValueError("The truth value of an array with more than one "ValueError: The truth value of an array with more than one element is ambiguous. Use a.any() or a.all().
Traceback (most recent call last):


 "/opt/deepvariant/bin/run_deepvariant.py", line 421, in <module>

app.run(main)


 "/usr/local/lib/python3.6/dist-packages/absl/app.py", line 299, in run

_run_main(main, args)


 "/usr/local/lib/python3.6/dist-packages/absl/app.py", line 250, in _run_main

sys.exit(main(argv))


 "/opt/deepvariant/bin/run_deepvariant.py", line 414, in main

subprocess.check_call(command, shell=True, executable='/bin/bash')


 "/usr/lib/python3.6/subprocess.py", line 311, in check_call

raise CalledProcessError(retcode, cmd)
subprocess.CalledProcessError: Command '( time seq 0 23 | parallel -q --halt 2 --line-buffer /opt/deepvariant/bin/make_examples --mode calling --ref ref.fa --reads reads.bam --examples "/tmp/tmp7rsj5zvh/make_examples.tfrecord@24.gz" --add_hp_channel --alt_aligned_pileup "diff_channels" --noparse_sam_aux_fields --norealign_reads --nosort_by_haplotypes --vsc_min_fraction_indels "0.12" --task {} )' returned non-zero exit status 252.
