Traceback (most recent call last):


 "C:\Users\Dipanshu\Anaconda3\lib\site-packages\qtconsole\manager.py", line 27, in poll

super(QtKernelRestarter, self).poll()


 "C:\Users\Dipanshu\Anaconda3\lib\site-packages\jupyter_client\restarter.py", line 113, in poll

self.kernel_manager.restart_kernel(now=True, newports=newports)


 "C:\Users\Dipanshu\Anaconda3\lib\site-packages\jupyter_client\manager.py", line 368, in restart_kernel

self.start_kernel(**self._launch_args)


 "C:\Users\Dipanshu\Anaconda3\lib\site-packages\jupyter_client\manager.py", line 261, in start_kernel

self._connect_control_socket()


 "C:\Users\Dipanshu\Anaconda3\lib\site-packages\jupyter_client\manager.py", line 210, in _connect_control_socket

self._control_socket = self.connect_control()


 "C:\Users\Dipanshu\Anaconda3\lib\site-packages\jupyter_client\connect.py", line 571, in connect_control

return self._create_connected_socket('control', identity=identity)


 "C:\Users\Dipanshu\Anaconda3\lib\site-packages\jupyter_client\connect.py", line 543, in _create_connected_socket

sock = self.context.socket(socket_type)


 "C:\Users\Dipanshu\Anaconda3\lib\site-packages\traitlets\traitlets.py", line 556, in __get__

return self.get(obj, cls)


 "C:\Users\Dipanshu\Anaconda3\lib\site-packages\traitlets\traitlets.py", line 535, in get

value = self._validate(obj, dynamic_default())


 "C:\Users\Dipanshu\Anaconda3\lib\site-packages\jupyter_client\manager.py", line 42, in _context_default

return zmq.Context.instance()


 "C:\Users\Dipanshu\Anaconda3\lib\site-packages\zmq\sugar\context.py", line 108, in instance

cls._instance = cls(io_threads=io_threads)


 "zmq/backend/cython/context.pyx", line 49, in zmq.backend.cython.context.Context.__cinit__
zmq.error.ZMQError: Unknown error

Traceback (most recent call last):


 "/opt/deepvariant/bin/run_deepvariant.py", line 317, in <module>

app.run(main)


 "/usr/local/lib/python2.7/dist-packages/absl/app.py", line 300, in run

_run_main(main, args)


 "/usr/local/lib/python2.7/dist-packages/absl/app.py", line 251, in _run_main

sys.exit(main(argv))


 "/opt/deepvariant/bin/run_deepvariant.py", line 307, in main

subprocess.check_call(command, shell=True, executable='/bin/bash')


 "/usr/lib/python2.7/subprocess.py", line 541, in check_call

raise CalledProcessError(retcode, cmd)
subprocess.CalledProcessError: Command 'time seq 0 0 | parallel -k --line-buffer /opt/deepvariant/bin/make_examples --mode calling --ref "/public/home/dkim142/quickstart-testdata/ucsc.hg19.chr20.unittest.fasta" --reads "/public/home/dkim142/quickstart-testdata/NA12878_S1.chr20.10_10p1mb.bam" --examples "/tmp/deepvariant_tmp_output/make_examples.tfrecord@1.gz" --gvcf "/tmp/deepvariant_tmp_output/gvcf.tfrecord@1.gz" --regions "chr20:10,000,000-10,010,000" --task {}' returned non-zero exit status 1
