Traceback (most recent call last):


 "/export/home/ncit/external/a.mizeranschi/sra-tools/anaconda/bin/whatshap", line 12, in <module>

sys.exit(main())


 "/export/home/ncit/external/a.mizeranschi/sra-tools/anaconda/lib/python3.6/site-packages/whatshap/__main__.py", line 83, in main

module.main(args)


 "/export/home/ncit/external/a.mizeranschi/sra-tools/anaconda/lib/python3.6/site-packages/whatshap/phase.py", line 1114, in main

run_whatshap(**vars(args))


 "/export/home/ncit/external/a.mizeranschi/sra-tools/anaconda/lib/python3.6/site-packages/whatshap/phase.py", line 663, in run_whatshap

for variant_table in vcf_reader:


 "/export/home/ncit/external/a.mizeranschi/sra-tools/anaconda/lib/python3.6/site-packages/whatshap/vcf.py", line 328, in __iter__

for chromosome, records in self._group_by_chromosome():


 "/export/home/ncit/external/a.mizeranschi/sra-tools/anaconda/lib/python3.6/site-packages/whatshap/vcf.py", line 305, in _group_by_chromosome

for record in self._vcf_reader:


 "/export/home/ncit/external/a.mizeranschi/sra-tools/anaconda/lib/python3.6/site-packages/vcf/parser.py", line 586, in __next__

samples = self._parse_samples(row[9:], fmt, record)


 "/export/home/ncit/external/a.mizeranschi/sra-tools/anaconda/lib/python3.6/site-packages/vcf/parser.py", line 483, in _parse_samples

sampdat[i] = float(vals)
ValueError: could not convert string to float: '33,41'


Traceback (most recent call last):

 "/usr/lib/python2.7/dist-packages/salt/minion.py", line 639, in _thread_return
ret['return'] = func(*args, **kwargs)

 "/usr/lib/python2.7/dist-packages/salt/modules/postgres.py", line 371, in user_list
if len(ver) >= 2 and int(ver[0]) >= 9 and int(ver[1]) >= 1:
ValueError: invalid literal for int() with base 10: '3beta2'