sparql/drugbank-target-seq.rq

#+ summary: We should add a summary.
#+ endpoint: "http://example.com/sparql"

PREFIX dv: <http://bio2rdf.org/drugbank_vocabulary:>
PREFIX hv: <http://bio2rdf.org/hgnc_vocabulary:>
PREFIX sider: <http://bio2rdf.org/sider_vocabulary:>

SELECT distinct ?geneid ?seq
{
  ?drug <http://bio2rdf.org/openpredict_vocabulary:indication> ?disease .
  ?d a dv:Drug .
  ?d dv:target ?t .
  #?t a dv:Target .
  ?t dv:x-hgnc ?hgnc .
  ?hgnc hv:x-ncbigene ?ncbi .
  ?t dv:amino-acid-sequence ?seq .
BIND ( STRAFTER(str(?ncbi),"http://bio2rdf.org/ncbigene:") AS ?geneid)
}