sparql/drugbank-sider-sideeffects.rq

#+ summary: We should add a summary.
#+ endpoint: "http://example.com/sparql"

PREFIX dv: <http://bio2rdf.org/drugbank_vocabulary:>
PREFIX ov: <http://bio2rdf.org/openpredict_vocabulary:>
PREFIX sider: <http://bio2rdf.org/sider_vocabulary:>

SELECT distinct ?drugid ?umlsid
{
?dia sider:drug ?stitch_flat .
?dia sider:effect ?se .
{
?stitch_flat sider:x-pubchem.compound ?pc .
}
UNION{
?stitch_flat sider:stitch-stereo ?stitch_stereo .
?stitch_stereo sider:x-pubchem.compound ?pc .
}
{
?d ov:x-pubchemcompound ?pc  .
}
UNION 
{
?d dv:x-pubchemcompound ?pc  .       
}
?d ov:indication ?disease .     
BIND(STRAFTER( str(?d), "http://bio2rdf.org/drugbank:") AS ?drugid) 
BIND(STRAFTER( str(?se), "http://bio2rdf.org/umls:") AS ?umlsid)
}