def setup(self, database):
self.db = database<EOL>self.hgnc_collection = database.hgnc_gene<EOL>self.user_collection = database.user<EOL>self.whitelist_collection = database.whitelist<EOL>self.institute_collection = database.institute<EOL>self.event_collection = database.event<EOL>self.case_collection = database.case<EOL>self.panel_collection = database.gene_panel<EOL>self.hpo_term_collection = database.hpo_term<EOL>self.disease_term_collection = database.disease_term<EOL>self.variant_collection = database.variant<EOL>self.acmg_collection = database.acmg<EOL>self.clinvar_collection = database.clinvar<EOL>self.clinvar_submission_collection = database.clinvar_submission<EOL>self.exon_collection = database.exon<EOL>self.transcript_collection = database.transcript<EOL>
Setup connection to database.