prompt: You will be provided with a partial code base and an issue statement explaining a problem to resolve.
  <issue>
  Upgrade `flakehell` in the pre-commit hook
  It seems that `flakehell` is not actively maintained, and it is incompatible with `flake8 4.x` released in last October (see flakehell/flakehell#22). That issue is not resolved after a few months. If a new developer of NetKet runs `pre-commit install-hooks`, it will just fail.
  
  We may use [this fix](https://github.com/flakehell/flakehell/pull/23#issuecomment-985879201), or change it to [flakeheaven](https://github.com/flakeheaven/flakeheaven) which seems more actively maintained.
  
  </issue>
  <code>
  [start of setup.py]
  1 from setuptools import setup, find_packages
  2 
  3 DEV_DEPENDENCIES = [
  4     "pytest>=6",
  5     "pytest-xdist>=2",
  6     "coverage>=5",
  7     "pytest-cov>=2.10.1",
  8     "networkx~=2.4",
  9     "flaky>=3.7",
  10     "pre-commit",
  11     "black==22.1.0",
  12     "flakehell>=0.9",
  13 ]
  14 MPI_DEPENDENCIES = ["mpi4py>=3.0.1, <4", "mpi4jax~=0.3.1"]
  15 EXTRA_DEPENDENCIES = ["tensorboardx>=2.0.0", "openfermion>=1.0.0"]
  16 BASE_DEPENDENCIES = [
  17     "numpy~=1.18",
  18     "scipy>=1.5.3, <2",
  19     "tqdm~=4.60",
  20     "plum-dispatch~=1.5.1",
  21     "numba>=0.52, <0.56",
  22     "igraph~=0.9.8",
  23     "jax>=0.2.23, <0.4",
  24     "jaxlib>=0.1.69",
  25     "flax>=0.3.5, <0.5",
  26     "orjson~=3.4",
  27     "optax>=0.1.1, <0.2",
  28     "numba4jax>=0.0.3, <0.1",
  29 ]
  30 
  31 setup(
  32     name="netket",
  33     author="Giuseppe Carleo et al.",
  34     url="http://github.com/netket/netket",
  35     author_email="netket@netket.org",
  36     license="Apache 2.0",
  37     description="Netket : Machine Learning techniques for many-body quantum systems.",
  38     long_description="""NetKet is an open-source project delivering cutting-edge
  39          methods for the study of many-body quantum systems with artificial
  40          neural networks and machine learning techniques.""",
  41     classifiers=[
  42         "Programming Language :: Python :: 3",
  43         "Development Status :: 5 - Production/Stable",
  44         "Intended Audience :: Science/Research",
  45         "License :: OSI Approved :: Apache Software License",
  46         "Operating System :: MacOS :: MacOS X",
  47         "Operating System :: POSIX :: Linux",
  48         "Operating System :: Unix",
  49         "Topic :: Scientific/Engineering :: Physics",
  50     ],
  51     packages=find_packages(),
  52     install_requires=BASE_DEPENDENCIES,
  53     python_requires=">=3.7",
  54     extras_require={
  55         "dev": DEV_DEPENDENCIES,
  56         "mpi": MPI_DEPENDENCIES,
  57         "extra": EXTRA_DEPENDENCIES,
  58         "all": MPI_DEPENDENCIES + DEV_DEPENDENCIES + EXTRA_DEPENDENCIES,
  59     },
  60 )
  61
  [end of setup.py]
  </code>
  
  I need you to solve this issue by generating a single patch file that I can apply directly to this repository using git apply. Please respond with a single patch file in the following format.
  <patch>
  diff --git a/file.py b/file.py
  --- a/file.py
  +++ b/file.py
  @@ -1,27 +1,35 @@
   def euclidean(a, b):
  -    while b:
  -        a, b = b, a % b
  -    return a
  +    if b == 0:
  +        return a
  +    return euclidean(b, a % b)
   
   
   def bresenham(x0, y0, x1, y1):
       points = []
       dx = abs(x1 - x0)
       dy = abs(y1 - y0)
  -    sx = 1 if x0 < x1 else -1
  -    sy = 1 if y0 < y1 else -1
  -    err = dx - dy
  +    x, y = x0, y0
  +    sx = -1 if x0 > x1 else 1
  +    sy = -1 if y0 > y1 else 1
   
  -    while True:
  -        points.append((x0, y0))
  -        if x0 == x1 and y0 == y1:
  -            break
  -        e2 = 2 * err
  -        if e2 > -dy:
  -            err -= dy
  -            x0 += sx
  -        if e2 < dx:
  -            err += dx
  -            y0 += sy
  +    if dx > dy:
  +        err = dx / 2.0
  +        while x != x1:
  +            points.append((x, y))
  +            err -= dy
  +            if err < 0:
  +                y += sy
  +                err += dx
  +            x += sx
  +    else:
  +        err = dy / 2.0
  +        while y != y1:
  +            points.append((x, y))
  +            err -= dx
  +            if err < 0:
  +                x += sx
  +                err += dy
  +            y += sy
  +
  +    points.append((x, y))
       return points
  
  </patch>
golden_diff: diff --git a/setup.py b/setup.py
  --- a/setup.py
  +++ b/setup.py
  @@ -6,10 +6,9 @@
       "coverage>=5",
       "pytest-cov>=2.10.1",
       "networkx~=2.4",
  -    "flaky>=3.7",
  -    "pre-commit",
  +    "pre-commit>=2.7",
       "black==22.1.0",
  -    "flakehell>=0.9",
  +    "flake8==4.0.1",
   ]
   MPI_DEPENDENCIES = ["mpi4py>=3.0.1, <4", "mpi4jax~=0.3.1"]
   EXTRA_DEPENDENCIES = ["tensorboardx>=2.0.0", "openfermion>=1.0.0"]
  
verification_info: {"golden_diff": "diff --git a/setup.py b/setup.py\n--- a/setup.py\n+++ b/setup.py\n@@ -6,10 +6,9 @@\n     \"coverage>=5\",\n     \"pytest-cov>=2.10.1\",\n     \"networkx~=2.4\",\n-    \"flaky>=3.7\",\n-    \"pre-commit\",\n+    \"pre-commit>=2.7\",\n     \"black==22.1.0\",\n-    \"flakehell>=0.9\",\n+    \"flake8==4.0.1\",\n ]\n MPI_DEPENDENCIES = [\"mpi4py>=3.0.1, <4\", \"mpi4jax~=0.3.1\"]\n EXTRA_DEPENDENCIES = [\"tensorboardx>=2.0.0\", \"openfermion>=1.0.0\"]\n", "issue": "Upgrade `flakehell` in the pre-commit hook\nIt seems that `flakehell` is not actively maintained, and it is incompatible with `flake8 4.x` released in last October (see flakehell/flakehell#22). That issue is not resolved after a few months. If a new developer of NetKet runs `pre-commit install-hooks`, it will just fail.\r\n\r\nWe may use [this fix](https://github.com/flakehell/flakehell/pull/23#issuecomment-985879201), or change it to [flakeheaven](https://github.com/flakeheaven/flakeheaven) which seems more actively maintained.\n", "before_files": [{"content": "from setuptools import setup, find_packages\n\nDEV_DEPENDENCIES = [\n    \"pytest>=6\",\n    \"pytest-xdist>=2\",\n    \"coverage>=5\",\n    \"pytest-cov>=2.10.1\",\n    \"networkx~=2.4\",\n    \"flaky>=3.7\",\n    \"pre-commit\",\n    \"black==22.1.0\",\n    \"flakehell>=0.9\",\n]\nMPI_DEPENDENCIES = [\"mpi4py>=3.0.1, <4\", \"mpi4jax~=0.3.1\"]\nEXTRA_DEPENDENCIES = [\"tensorboardx>=2.0.0\", \"openfermion>=1.0.0\"]\nBASE_DEPENDENCIES = [\n    \"numpy~=1.18\",\n    \"scipy>=1.5.3, <2\",\n    \"tqdm~=4.60\",\n    \"plum-dispatch~=1.5.1\",\n    \"numba>=0.52, <0.56\",\n    \"igraph~=0.9.8\",\n    \"jax>=0.2.23, <0.4\",\n    \"jaxlib>=0.1.69\",\n    \"flax>=0.3.5, <0.5\",\n    \"orjson~=3.4\",\n    \"optax>=0.1.1, <0.2\",\n    \"numba4jax>=0.0.3, <0.1\",\n]\n\nsetup(\n    name=\"netket\",\n    author=\"Giuseppe Carleo et al.\",\n    url=\"http://github.com/netket/netket\",\n    author_email=\"netket@netket.org\",\n    license=\"Apache 2.0\",\n    description=\"Netket : Machine Learning techniques for many-body quantum systems.\",\n    long_description=\"\"\"NetKet is an open-source project delivering cutting-edge\n         methods for the study of many-body quantum systems with artificial\n         neural networks and machine learning techniques.\"\"\",\n    classifiers=[\n        \"Programming Language :: Python :: 3\",\n        \"Development Status :: 5 - Production/Stable\",\n        \"Intended Audience :: Science/Research\",\n        \"License :: OSI Approved :: Apache Software License\",\n        \"Operating System :: MacOS :: MacOS X\",\n        \"Operating System :: POSIX :: Linux\",\n        \"Operating System :: Unix\",\n        \"Topic :: Scientific/Engineering :: Physics\",\n    ],\n    packages=find_packages(),\n    install_requires=BASE_DEPENDENCIES,\n    python_requires=\">=3.7\",\n    extras_require={\n        \"dev\": DEV_DEPENDENCIES,\n        \"mpi\": MPI_DEPENDENCIES,\n        \"extra\": EXTRA_DEPENDENCIES,\n        \"all\": MPI_DEPENDENCIES + DEV_DEPENDENCIES + EXTRA_DEPENDENCIES,\n    },\n)\n", "path": "setup.py"}]}