7. The system of claim 1 , wherein the host computing system is adapted to modify the query with up to a predetermined number of a plurality of character mismatches when the first or next suffix array interval is not valid.
7. The system of claim 1 , wherein the host computing system is adapted to modify the query with up to a predetermined number of a plurality of character mismatches when the first or next suffix array interval is not valid. 8. The system of claim 7 , wherein the plurality of character mismatches comprise at least one character mismatch selected from the group consisting of: a character insertion, a character deletion, or a character substitution.