1. A method comprising: receiving a data file including a dataset into a collaborative dataset consolidation system; formatting the dataset to form a first atomized dataset including atomized data points each including data representing at least two objects and an association between the two objects; forming a second atomized dataset including the first atomized dataset and one or more other atomized datasets; receiving data representing a query into the collaborative dataset consolidation system, the query being associated with an identifier; identifying a subset of the second atomized dataset relevant to the query, wherein portions of the second atomized dataset are disposed in different data repositories; generating a plurality of sub-queries each of which is configured to access at least one of the different data repositories; and retrieving data representing query results from the at least one of the different data repositories.