1. A method for processing a bioinformatics pipeline, the method comprising: receiving, from a user, instructions to process a bioinformatics pipeline, the bioinformatics pipeline comprising a plurality of genomic tools, wherein at least a first one of the genomic tools comprises an executable and wrapper metadata; creating a first job for execution, the first job comprising the executable of the first one of the genomic tools and input data, wherein the first job further comprises a cloud instance; modifying the bioinformatics pipeline to avoid an error relating to the executable of the first genomic tool, the modification comprising replacing the executable of the first job with an executable of an alternative genomic tool according to the wrapper metadata of the first one of the genomic tools; and initiating execution of the first job on the cloud instance, wherein the modification of the first job avoids the error.