1. A method for automated part probing of a fixture plate with a machining system, the method comprising: automatically selecting a first and second virtual part model from a plurality of virtual part models based on optimization of a set of manufacturing parameters, wherein the first and second virtual part model are associated with a first and second user account, respectively; automatically selecting a first and second standard virtual fixture from a plurality of standard virtual fixtures based on the first and second virtual part models, respectively; automatically generating a virtual fixture assembly comprising a first and second virtual part precursor, corresponding to the first and second virtual part models, respectively, fixed to a standard virtual fixture plate by the first and second standard virtual fixtures, respectively; generating fixturing instructions to fix a first and second physical part precursor to a standard physical fixture plate using a first and second standard physical fixture to form a physical fixture assembly corresponding to the virtual fixture assembly, wherein the first and second physical part precursors correspond to the first and second virtual part precursors, respectively, the first and second standard physical fixtures correspond to the first and second standard virtual fixtures, respectively, and the physical standard fixture plate corresponds to the standard virtual fixture plate; generating probing instructions for the physical fixture assembly based on the virtual fixture assembly and a predetermined work coordinate system; generating expected probe outputs based on the virtual fixture assembly; controlling the machining system to execute the probing instructions on the physical fixture assembly; receiving actual probe outputs from the machining system for the physical fixture assembly; and validating the physical fixture assembly based on the actual probe outputs and the expected probe outputs.