1. A system, comprising: a memory that stores computer executable components; and a processor that executes the computer executable components stored in the memory, the processor generates a process model and a biological model, the process model represents a simulation of a defined physical production process, and the biological model represents a simulation of biological activity of bacteria based on a determination that the bacteria is present within a first portion of the defined physical production process based on a measurement of the bacteria at the first portion; a controller that superimposes the biological model on the process model by integrating the biological model over the process model, wherein the controller models bio-chemical operations occurring at a second portion of the defined physical production process based on the biological model being superimposed on the process model and based on characteristics of the bacteria and an environment of the defined physical production process, wherein a growth of the bacteria in the biological model is simulated within the process model, and wherein a bacteria level at the second portion is unmeasured in the production process and is estimated based on the modeled bio-chemical operations; and an adjustment component that dynamically modifies at least a portion of a control sequence or a schedule of the second portion of the defined physical production process based, in part, upon the model of the bio-chemical operations at the second portion based on the bacteria level at the second portion being above a defined threshold level, wherein the modification by the adjustment component retains bacteria levels at the second portion below the defined threshold level.