title: pyrocms page throwing error 500
body: <p>I installed pyrocms on a clients server with godaddy, its regular hosting and he has multiple domains linked to folders.
  when i navigate to the site, the homepage opens up properly, the links to the other pages like the contact page the links are wrong, i have </p>
  
  <blockquote>
    <p><a href="http://thebellsschools.org/thebellsschools/site/index.php/contact" rel="nofollow">http://thebellsschools.org/thebellsschools/site/index.php/contact</a></p>
  </blockquote>
  
  <p>instead of</p>
  
  <blockquote>
    <p><a href="http://thebellsschools.org/site/index.php/contact" rel="nofollow">http://thebellsschools.org/site/index.php/contact</a></p>
  </blockquote>
  
  <p>Am also using the default .htaccess file that ships with pyrocms</p>
  
  <pre><code># Multiple Environment config
  # Set this to development, staging or production
  # SetEnv PYRO_ENV production
  
  &lt;IfModule mod_rewrite.c&gt;
  
      # Make sure directory listing is disabled
      Options +FollowSymLinks -Indexes
      # disable the Apache MultiViews directive if it is enabled on the server. It plays havoc with URL rewriting
      Options -MultiViews
      RewriteEngine on
  
      # Automatically determine and set the PYRO_ENV variable
    #RewriteCond %{HTTP_HOST} ^local.domain.com$
    #RewriteRule (.*) $1 [E=PYRO_ENV:development]
  
    #RewriteCond %{HTTP_HOST} ^stage.domain.com$
    #RewriteRule (.*) $1 [E=PYRO_ENV:staging]
  
    #RewriteCond %{HTTP_HOST} ^domain.com$
    #RewriteRule (.*) $1 [E=PYRO_ENV:production]
  
      # NOTICE: If you get a 404 play with combinations of the following commented out lines
      #AllowOverride All
      #RewriteBase /wherever/pyro/is
  
      # Restrict your site to only one domain
      # !important USE ONLY ONE OPTION
  
      # Option 1: To rewrite "www.domain.com -&gt; domain.com" uncomment the following lines.
      #RewriteCond %{HTTPS} !=on
      #RewriteCond %{HTTP_HOST} ^www\.(.+)$ [NC]
      #RewriteRule ^(.*)$ http://%1/$1 [R=301,L]
  
      # Option 2: To rewrite "domain.com -&gt; www.domain.com" uncomment the following lines.
      #RewriteCond %{HTTPS} !=on
      #RewriteCond %{HTTP_HOST} !^www\..+$ [NC]
      #RewriteCond %{HTTP_HOST} (.+)$ [NC]
      #RewriteRule ^(.*)$ http://www.%1/$1 [R=301,L]
  
      # Keep people out of codeigniter directory and Git/Mercurial data
      RedirectMatch 403 ^/.*/(system/cms/cache|system/codeigniter|system/cms/config|system/cms/logs|\.git|\.hg).*$
  
      # Send request via index.php (again, not if its a real file or folder)
      RewriteCond %{REQUEST_FILENAME} !-f
      RewriteCond %{REQUEST_FILENAME} !-d
  
      &lt;IfModule mod_php5.c&gt;
          RewriteRule ^(.*)$ index.php/$1 [L]
      &lt;/IfModule&gt;
  
      &lt;IfModule !mod_php5.c&gt;
          RewriteRule ^(.*)$ index.php?/$1 [L]
      &lt;/IfModule&gt;
  
  &lt;/IfModule&gt;
  </code></pre>
  
  <p>What could be wrong?</p>