title: Homebrew - Latest Apple Update broke Java based installs, hadoop, cassandra, hive, etc
body: <p>I have posted this on Homebrew's site to no avail (<a href="http://goo.gl/S4xwF" rel="nofollow">http://goo.gl/S4xwF</a>)</p>
  
  <p>Strange thing 5 day's ago, updated Apple (combo update, Xcode, java, iTunes) today. This resulted in having bin icons appearing on the dock for cassandra, hive and hadoop. Performed update/upgrade on brew (no issues from doctor reported) to update to the latest, installed latest command line tools from Xcode - but nothing helps.</p>
  
  <p>The biggest issue is when running hive queries this is launching several task windows which causes window focus to these "bin" windows. So essentially I can't do anything until the processes are completed.</p>
  
  <p>Any suggestions? I can't find anything online, like I said this just started and I've spent almost the entire day researching.</p>
  
  <p>executing this command will spawn these "bin" windows
  sh /usr/local/Cellar/hadoop/1*/bin/start-all.sh</p>
  
  <p>or 
  launchctl unload ~/Library/LaunchAgents/homebrew.mxcl.cassandra.plist</p>
  
  <p>Here are the results from brew --config</p>
  
  <pre><code>HOMEBREW_VERSION: 0.9.4
  ORIGIN: https://github.com/mxcl/homebrew
  HEAD: 5d6df73
  HOMEBREW_PREFIX: /usr/local
  HOMEBREW_CELLAR: /usr/local/Cellar
  CPU: quad-core 64-bit ivybridge
  OS X: 10.8.4-x86_64
  Xcode: 4.6.3
  CLT: 4.6.0.0.1.1365549073
  LLVM-GCC: build 2336
  Clang: 4.2 build 425
  X11: N/A
  System Ruby: 1.8.7-358
  Perl: /usr/bin/perl
  Python: /usr/local/bin/python =&gt; /usr/local/Cellar/python/2.7.4/Frameworks/Python.framework/Versions/2.7/bin/python2.7
  Ruby: /Users/joshcrosby/.rvm/rubies/ruby-1.9.3-p392/bin/ruby
  </code></pre>
  
  <p>Any help greatly appreciated!!</p>
  
  <p>Java bin windows in dock
  - See Homebrew Post for images, SO won't let me post it, not enough questions :)</p>