Sequence Databases for training
Browse files
README.md
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---
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dataset_info:
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features:
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- name: sequence_id
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dtype: int64
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- name: dataset
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dtype: string
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- name: description
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dtype: string
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- name: label
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dtype: string
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- name: y
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dtype: int64
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- name: sequence
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dtype: string
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- name: __index_level_0__
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dtype: int64
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splits:
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- name: ESCHERICHIA_SEQDB
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num_bytes: 22428612
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num_examples: 394
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- name: EXTREMOPHILE_SEQDB
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num_bytes: 739732
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num_examples: 16
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- name: BACPHLIP_TRAINING_SEQDB
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num_bytes: 121740866
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num_examples: 1868
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- name: BACPHLIP_VALIDATION_SEQDB
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num_bytes: 19956326
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num_examples: 246
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download_size: 76237700
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dataset_size: 164865536
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configs:
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- config_name: default
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data_files:
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- split: ESCHERICHIA_SEQDB
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path: data/ESCHERICHIA_SEQDB-*
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- split: EXTREMOPHILE_SEQDB
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path: data/EXTREMOPHILE_SEQDB-*
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- split: BACPHLIP_TRAINING_SEQDB
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path: data/BACPHLIP_TRAINING_SEQDB-*
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- split: BACPHLIP_VALIDATION_SEQDB
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path: data/BACPHLIP_VALIDATION_SEQDB-*
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---
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data/BACPHLIP_TRAINING_SEQDB-00000-of-00001.parquet
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version https://git-lfs.github.com/spec/v1
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oid sha256:e5ca1d2e7f6b3fa4c078cfb8c0373c2dac07c90a35e543ece315f106564bce62
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size 56418904
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data/BACPHLIP_VALIDATION_SEQDB-00000-of-00001.parquet
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version https://git-lfs.github.com/spec/v1
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oid sha256:c60b64e1980c3652bdb7adadd3e53773ec331f323c8623730f1b0cfe65f11f70
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size 9315946
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data/ESCHERICHIA_SEQDB-00000-of-00001.parquet
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version https://git-lfs.github.com/spec/v1
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oid sha256:3b9e2626427752f39ad275e91cbfbd3358c1c49598f80d10c8abda01ec830f53
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size 10154617
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data/EXTREMOPHILE_SEQDB-00000-of-00001.parquet
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version https://git-lfs.github.com/spec/v1
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oid sha256:53e1da63677ab10a8a8fe59039019d25eccd00dad6b0c93960585146a1b7e94a
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size 348233
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