mstz commited on
Commit
818a273
·
1 Parent(s): 873a754

Update heart_failure.py

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Files changed (1) hide show
  1. heart_failure.py +25 -13
heart_failure.py CHANGED
@@ -36,16 +36,16 @@ urls_per_split = {
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  features_types_per_config = {
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  "death": {
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  "age": datasets.Value("int8"),
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- "has_anaemia": datasets.Value("int8"),
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  "creatinine_phosphokinase_concentration_in_blood": datasets.Value("float64"),
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- "has_diabetes": datasets.Value("int8"),
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  "heart_ejection_fraction": datasets.Value("float64"),
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- "has_high_blood_pressure": datasets.Value("int8"),
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  "platelets_concentration_in_blood": datasets.Value("float64"),
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  "serum_creatinine_concentration_in_blood": datasets.Value("float64"),
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  "serum_sodium_concentration_in_blood": datasets.Value("float64"),
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- "sex": datasets.Value("int8"),
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- "is_smoker": datasets.Value("int8"),
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  "days_in_study": datasets.Value("int64"),
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  "is_dead": datasets.ClassLabel(num_classes=2, names=("no", "yes"))
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  }
@@ -85,18 +85,30 @@ class HeartFailure(datasets.GeneratorBasedBuilder):
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  ]
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  def _generate_examples(self, filepath: str):
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- if self.config.name == "death":
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- data = pandas.read_csv(filepath)
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- data = self.preprocess(data, config=self.config.name)
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- for row_id, row in data.iterrows():
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- data_row = dict(row)
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- yield row_id, data_row
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- else:
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- raise ValueError(f"Unknown config: {config}")
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  def preprocess(self, data: pandas.DataFrame, config: str = "death") -> pandas.DataFrame:
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  data.columns = _BASE_FEATURE_NAMES
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
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  return data
 
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  features_types_per_config = {
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  "death": {
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  "age": datasets.Value("int8"),
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+ "has_anaemia": datasets.Value("bool"),
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  "creatinine_phosphokinase_concentration_in_blood": datasets.Value("float64"),
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+ "has_diabetes": datasets.Value("bool"),
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  "heart_ejection_fraction": datasets.Value("float64"),
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+ "has_high_blood_pressure": datasets.Value("bool"),
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  "platelets_concentration_in_blood": datasets.Value("float64"),
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  "serum_creatinine_concentration_in_blood": datasets.Value("float64"),
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  "serum_sodium_concentration_in_blood": datasets.Value("float64"),
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+ "is_male": datasets.Value("bool"),
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+ "is_smoker": datasets.Value("bool"),
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  "days_in_study": datasets.Value("int64"),
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  "is_dead": datasets.ClassLabel(num_classes=2, names=("no", "yes"))
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  }
 
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  ]
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  def _generate_examples(self, filepath: str):
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+ data = pandas.read_csv(filepath)
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+ data = self.preprocess(data, config=self.config.name)
 
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+ for row_id, row in data.iterrows():
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+ data_row = dict(row)
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+ yield row_id, data_row
 
 
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  def preprocess(self, data: pandas.DataFrame, config: str = "death") -> pandas.DataFrame:
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  data.columns = _BASE_FEATURE_NAMES
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+ data = data.astype({"has_anaemia": "bool", "has_diabetes": "bool", "has_high_blood_pressure": "bool", "is_male": "bool",
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+ "is_smoker": "bool"})
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+ "age": datasets.Value("int8"),
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+ "has_anaemia": datasets.Value("bool"),
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+ "creatinine_phosphokinase_concentration_in_blood": datasets.Value("float64"),
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+ "has_diabetes": datasets.Value("bool"),
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+ "heart_ejection_fraction": datasets.Value("float64"),
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+ "has_high_blood_pressure": datasets.Value("bool"),
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+ "platelets_concentration_in_blood": datasets.Value("float64"),
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+ "serum_creatinine_concentration_in_blood": datasets.Value("float64"),
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+ "serum_sodium_concentration_in_blood": datasets.Value("float64"),
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+ "is_male": datasets.Value("bool"),
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+ "is_smoker": datasets.Value("bool"),
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+ "days_in_study": datasets.Value("int64"),
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+ "is_dead": datasets.ClassLabel(num_classes=2, names=("no", "yes"))
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  return data