def save(self):
        tmp_path = self.path + '.tmp'
        with open(tmp_path, 'w') as f:
            f.write(json.dumps(self.body_labels.items()))
        os.rename(tmp_path, self.path)
def compute_rbf_kernel_matrix(X):
    """Compute the RBF kernel matrix with sigma2 as the median pairwise
    distance.
    """
    sigma2 = np.median(pairwise_distances(X, metric='euclidean'))**2
    K = pairwise_kernels(X, X, metric='rbf', gamma=1.0/sigma2, n_jobs=-1)
    return K