def test_deepcopy_subset(adata, spmat: type):
    adata.obsp["arr"] = np.zeros((adata.n_obs, adata.n_obs))
    adata.obsp["spmat"] = spmat((adata.n_obs, adata.n_obs))

    adata = deepcopy(adata[:10].copy())

    assert isinstance(adata.obsp["arr"], np.ndarray)
    assert not isinstance(adata.obsp["arr"], ArrayView)
    np.testing.assert_array_equal(adata.obsp["arr"].shape, (10, 10))

    assert isinstance(adata.obsp["spmat"], spmat)
    assert not isinstance(
        adata.obsp["spmat"],
        SparseCSRView if spmat is sparse.csr_matrix else SparseCSCView,
    )
    np.testing.assert_array_equal(adata.obsp["spmat"].shape, (10, 10))
def connect ():
    '''
    Create the connection to the MongoDB and create 3 collections needed
    '''
    try:
        # Create the connection to the local host 
        conn = pymongo.MongoClient()
        print 'MongoDB Connection Successful'
    except pymongo.errors.ConnectionFailure, err:
        print 'MongoDB Connection Unsuccessful'
        return False