def getall(self):
        try:
            spec = {'data': {'$exists': 1}}
            fields = {'_id': 0}
            sort = [('tid', 1)]
            cur = self.db.docs.find(spec, fields, sort=sort)
        except Exception as e:
            raise DatabaseException(e)
        return [Document(**row) for row in cur]
def setup_run_environment(self, env):
        bashrc = self.prefix.etc.bashrc
        try:
            env.extend(EnvironmentModifications.from_sourcing_file(
                bashrc, clean=True
            ))
        except Exception as e:
            msg = 'unexpected error when sourcing OpenFOAM bashrc [{0}]'
            tty.warn(msg.format(str(e)))