def test_double_index(subset_func, subset_func2):
    adata = gen_adata((10, 10))
    obs_subset = subset_func(adata.obs_names)
    var_subset = subset_func2(adata.var_names)
    v1 = adata[obs_subset, var_subset]
    v2 = adata[obs_subset, :][:, var_subset]

    assert np.all(asarray(v1.X) == asarray(v2.X))
    assert np.all(v1.obs == v2.obs)
    assert np.all(v1.var == v2.var)
def runcmd(cmd, **kw):  # same code as in getlino.py
    """Run the cmd similar as os.system(), but stop when Ctrl-C."""
    # kw.update(stdout=subprocess.PIPE)
    # kw.update(stderr=subprocess.STDOUT)
    kw.update(shell=True)
    kw.update(universal_newlines=True)
    kw.update(check=True)
    # subprocess.check_output(cmd, **kw)
    subprocess.run(cmd, **kw)
    # os.system(cmd)