def __create_context(self, main_root):
		context_dir = os.path.join(main_root, 'context')
		safe_mkdir(context_dir)

		action_default = {}
		for unit, param in self.__task.data['workflow'].items():
			action_default[unit] = self.__action_mgr.default_config(param['type'])

		navigators = self.__config_mgr.navigator()
		context_format = self.__navigator_mgr.context_format(navigators)

		self.__context_mgr.create_context_file(self.__task.data, action_default, context_format, context_dir)
def balanced_accuracy_scoring(clf, X, y):
    """Scoring function that computes the balanced accuracy to be used
    internally in the cross-validation procedure.
    """
    y_pred = clf.predict(X)
    conf_mat = confusion_matrix(y, y_pred)
    bal_acc = 0.
    for i in range(len(conf_mat)):
        bal_acc += (float(conf_mat[i, i])) / np.sum(conf_mat[i])

    bal_acc /= len(conf_mat)
    return bal_acc