def test_not_set_subset_X(matrix_type, subset_func):
    adata = ad.AnnData(matrix_type(asarray(sparse.random(20, 20))))
    init_hash = joblib.hash(adata)
    orig_X_val = adata.X.copy()
    while True:
        subset_idx = slice_subset(adata.obs_names)
        if len(adata[subset_idx, :]) > 2:
            break
    subset = adata[subset_idx, :]

    subset = adata[:, subset_idx]

    internal_idx = _normalize_index(
        subset_func(np.arange(subset.X.shape[1])), subset.var_names
    )
    assert subset.is_view
    subset.X[:, internal_idx] = 1
    assert not subset.is_view
    assert not np.any(asarray(adata.X != orig_X_val))

    assert init_hash == joblib.hash(adata)
def from_file(
        self,
        filename: str,
        load: t.Callable[[t.IO[t.Any]], t.Mapping],
        silent: bool = False,
    ) -> bool:
        """Update the values in the config from a file that is loaded
        using the ``load`` parameter. The loaded data is passed to the
        :meth:`from_mapping` method.

        .. code-block:: python

            import toml
            app.config.from_file("config.toml", load=toml.load)

        :param filename: The path to the data file. This can be an
            absolute path or relative to the config root path.
        :param load: A callable that takes a file handle and returns a
            mapping of loaded data from the file.
        :type load: ``Callable[[Reader], Mapping]`` where ``Reader``
            implements a ``read`` method.
        :param silent: Ignore the file if it doesn't exist.

        .. versionadded:: 2.0
        """
        filename = os.path.join(self.root_path, filename)

        try:
            with open(filename) as f:
                obj = load(f)
        except OSError as e:
            if silent and e.errno in (errno.ENOENT, errno.EISDIR):
                return False

            e.strerror = f"Unable to load configuration file ({e.strerror})"
            raise

        return self.from_mapping(obj)