def test_set_obsm_key(adata):
    init_hash = joblib.hash(adata)

    orig_obsm_val = adata.obsm["o"].copy()
    subset_obsm = adata[:50]
    assert subset_obsm.is_view
    subset_obsm.obsm["o"] = np.ones((50, 20))
    assert not subset_obsm.is_view
    assert np.all(adata.obsm["o"] == orig_obsm_val)

    assert init_hash == joblib.hash(adata)
def compute_svm_cv(K, y, C=100.0, n_folds=5,
                   scoring=balanced_accuracy_scoring):
    """Compute cross-validated score of SVM with given precomputed kernel.
    """
    cv = StratifiedKFold(y, n_folds=n_folds)
    clf = SVC(C=C, kernel='precomputed', class_weight='auto')
    scores = cross_val_score(clf, K, y,
                             scoring=scoring, cv=cv)
    return scores.mean()