def install_pip(self, package, save=True, save_dev=False):
        """Installs a pip package.

        :param save: if `True`, pins the package to the Hydrogen requirements
            YAML file.
        :param save_dev: if `True`, pins the package as a development
            dependency to the Hydrogen requirements YAML file.
        :param return: a **single** :class:`Requirement` object, representing
            the installed version of the given package.
        """
        requirement = Requirement.coerce(package)
        click.echo("pip install " + requirement.package)
        cmd = envoy.run("pip install {}".format(str(requirement)))
        if cmd.status_code == 0:
            installed_packages = get_installed_pypackages()
            package = installed_packages[requirement.package]
            requirement.version = "=={}".format(package.version)
            if save:
                self.requirements["all"].add(requirement)
            if save_dev:
                self.requirements["dev"].add(requirement)
            if save or save_dev:
                self.requirements.save()
            return requirement
        else:
            fatal(cmd.std_err)
def gerrity_score(self):
        """
        Gerrity Score, which weights each cell in the contingency table by its observed relative frequency.
        :return:
        """
        k = self.table.shape[0]
        n = float(self.table.sum())
        p_o = self.table.sum(axis=0) / n
        p_sum = np.cumsum(p_o)[:-1]
        a = (1.0 - p_sum) / p_sum
        s = np.zeros(self.table.shape, dtype=float)
        for (i, j) in np.ndindex(*s.shape):
            if i == j:
                s[i, j] = 1.0 / (k - 1.0) * (np.sum(1.0 / a[0:j]) + np.sum(a[j:k - 1]))
            elif i < j:
                s[i, j] = 1.0 / (k - 1.0) * (np.sum(1.0 / a[0:i]) - (j - i) + np.sum(a[j:k - 1]))
            else:
                s[i, j] = s[j, i]
        return np.sum(self.table / float(self.table.sum()) * s)