def test_set_varm_key(adata):
    init_hash = joblib.hash(adata)

    orig_varm_val = adata.varm["o"].copy()
    subset_varm = adata[:, :50]
    assert subset_varm.is_view
    subset_varm.varm["o"] = np.ones((50, 20))
    assert not subset_varm.is_view
    assert np.all(adata.varm["o"] == orig_varm_val)

    assert init_hash == joblib.hash(adata)
def ProcessCommandLineArgs(parser, args):
  # TODO(ariblue): Delete this flag entirely at some future data, when the
  # existence of such a flag has been long forgotten.
  if args.output_file:
    parser.error('This flag is deprecated. Please use --output-dir instead.')

  try:
    os.makedirs(args.output_dir)
  except OSError:
    # Do nothing if the output directory already exists. Existing files will
    # get overwritten.
    pass

  args.output_dir = os.path.expanduser(args.output_dir)