def test_not_set_subset_X(matrix_type, subset_func):
    adata = ad.AnnData(matrix_type(asarray(sparse.random(20, 20))))
    init_hash = joblib.hash(adata)
    orig_X_val = adata.X.copy()
    while True:
        subset_idx = slice_subset(adata.obs_names)
        if len(adata[subset_idx, :]) > 2:
            break
    subset = adata[subset_idx, :]

    subset = adata[:, subset_idx]

    internal_idx = _normalize_index(
        subset_func(np.arange(subset.X.shape[1])), subset.var_names
    )
    assert subset.is_view
    subset.X[:, internal_idx] = 1
    assert not subset.is_view
    assert not np.any(asarray(adata.X != orig_X_val))

    assert init_hash == joblib.hash(adata)
def test_parse_sections():
    simple_mariofile_sections = dict(mariofile.parse_sections(SIMPLE_MARIOFILE.splitlines(True)))
    assert len(simple_mariofile_sections) == 3
    complex_mariofile_sections = dict(mariofile.parse_sections(COMPLEX_MARIOFILE.splitlines(True)))
    assert len(complex_mariofile_sections) == 2
    assert sorted(complex_mariofile_sections.keys()) == ['DEFAULT', 'section']
    assert complex_mariofile_sections['DEFAULT'] == ['default text\n', '\n']
    with pytest.raises(mariofile.ConfigurationFileError):
        dict(mariofile.parse_sections(GARBAGE_MARIOFILE.splitlines(True)))
    with pytest.raises(mariofile.ConfigurationFileError):
        dict(mariofile.parse_sections(INVALID_SECTION_MARIOFILE.splitlines(True)))
    more_complex_mariofile_sections = dict(
            mariofile.parse_sections(MORE_COMPLEX_MARIOFILE.splitlines(True))
    )
    more_complex_mariofile_sections_keys = ['DEFAULT', 'section_one', 'section_two', 'three']
    assert sorted(more_complex_mariofile_sections.keys()) == more_complex_mariofile_sections_keys
    assert more_complex_mariofile_sections['three'] == []