def __create_context(self, main_root):
		context_dir = os.path.join(main_root, 'context')
		safe_mkdir(context_dir)

		action_default = {}
		for unit, param in self.__task.data['workflow'].items():
			action_default[unit] = self.__action_mgr.default_config(param['type'])

		navigators = self.__config_mgr.navigator()
		context_format = self.__navigator_mgr.context_format(navigators)

		self.__context_mgr.create_context_file(self.__task.data, action_default, context_format, context_dir)
def compute_svm_cv(K, y, C=100.0, n_folds=5,
                   scoring=balanced_accuracy_scoring):
    """Compute cross-validated score of SVM with given precomputed kernel.
    """
    cv = StratifiedKFold(y, n_folds=n_folds)
    clf = SVC(C=C, kernel='precomputed', class_weight='auto')
    scores = cross_val_score(clf, K, y,
                             scoring=scoring, cv=cv)
    return scores.mean()