def __init__(self, manager, task_id, sub_ids=None, dry_run=False, resubmit=False):
		self.__manager = manager
		self.__task	= self.__manager.load_task(task_id)
		self.__sub_ids = sub_ids
		self.__dry_run = dry_run
		self.__resubmit = resubmit

		self.__logger = logging.getLogger('JSUB')
		if self.__sub_ids==None:
			self.__sub_ids=range(len(self.__task.data['jobvar']))

		self.__initialize_manager()
def compute_svm_cv(K, y, C=100.0, n_folds=5,
                   scoring=balanced_accuracy_scoring):
    """Compute cross-validated score of SVM with given precomputed kernel.
    """
    cv = StratifiedKFold(y, n_folds=n_folds)
    clf = SVC(C=C, kernel='precomputed', class_weight='auto')
    scores = cross_val_score(clf, K, y,
                             scoring=scoring, cv=cv)
    return scores.mean()