PMC5447568_01
Phylogenetic analysis of DENV-3 sequences using partial C-PrM sequence region.. Maximum-likelihood phylogenetic tree was inferred based on 49 DENV 3 partial Capsid-Pre membrane region (C-prM) nucleotide sequences (459 bp) by using Molecular Evolutionary Genetics Analysis (MEGA) version 6 software. Distance matrices were calculated using Kimura two-parameter model with Gamma distributed (G) rate among sites. Bootstrap values obtained from 1000 replicate trees are shown for key nodes (more than 70%). Scale is shown at the bottom as substitutions per site. GenBank accession number, place and year of isolation are indicated. Dengue 3 sequence related to this work is highlighted in blue. Cluster genotypes are identified in different colors and by the respective number in the left.
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Dengue virus serotype 3 genotype III was determined by C-PrM phylogenetic analysis (Fig. 1).