anchor.diff:  RUN git clone https://github.com/Sage-Bionetworks/Genie.git
   RUN git clone https://github.com/cBioPortal/cbioportal.git
   
  +RUN wget https://github.com/samtools/samtools/releases/download/1.3/samtools-1.3.tar.bz2
  +RUN tar jxf samtools-1.3.tar.bz2
  +WORKDIR /root/samtools-1.3
  +RUN make
  +RUN make install
  +
   WORKDIR /root/Genie/genie
  
positive.code: FROM ubuntu:14.04
  
  RUN echo "deb http://cran.rstudio.com/bin/linux/ubuntu xenial/" | tee -a /etc/apt/sources.list
  RUN gpg --keyserver keyserver.ubuntu.com --recv-key E084DAB9
  
negative.code: 	wget \
  	unzip \
  	tabix \
  	libncurses5-dev \
  	bedtools \ 
  	dos2unix \
  	python3 \
  	python3-pip \
  	r-base \
  	r-base-dev \
  	dpkg-dev \
  	libcurl3 \
  	libcurl3-dev \ 
  	libffi-dev 
  
  RUN pip3 install --upgrade pip
  RUN pip install synapseclient httplib2 pycrypto aacrgenie
  RUN pip install pandas numexpr --upgrade
  
  RUN rm /usr/bin/python 
  RUN ln -s /usr/bin/python3 /usr/bin/python 
  
  RUN apt-get install -y cpanminus
  RUN apt-get install -y libmysqlclient-dev
  