anchor.diff:                      --yes --force-yes
   
   #
  -# Install AUGUSTUS
  +# Install AUGUSTUS (binaries)
   #
   ADD http://bioinf.uni-greifswald.de/augustus/binaries/augustus-3.0.3.tar.gz /opt/augustus-3.0.3.tar.gz
   RUN cd /opt && \
       tar -xzvf augustus* && \
       rm -rf *.tar.gz && \
  -    mv augustus* augustus && \
  -    cd augustus && \
  -    make
  +    mv augustus* augustus
   
   #
   # Install GenomeTools (most recent git master)
  
positive.code: ENV AUGUSTUS_CONFIG_PATH /opt/augustus/config
  ENV RATT_HOME /opt/RATT
  ENV GT_RETAINIDS yes
  ENV PERL5LIB /opt/ORTHOMCLV1.4/:/opt/RATT:$PERL5LIB
  ENV PATH_TO_ORTHOMCL /opt/ORTHOMCLV1.4/
  ENV PATH /usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/opt/augustus/bin:/opt/augustus/scripts:/opt/ORTHOMCLV1.4:/opt/RATT:/opt/ABACAS2
  
negative.code:     rm -rf /opt/genometools-master*
  
  #
  # Add Perl deps (needed for OrthoMCL)
  #
  RUN cpanm --force Carp Bio::SearchIO List::Util Getopt::Long && \
      rm -rf /root/.cpanm/work/
  
  #
  