anchor.diff:      aws s3 cp --no-sign-request s3://mrneurodata/resources/ndmg_atlases.zip ./ && \
       unzip ndmg_atlases.zip
   
  +RUN mkdir /data && \
  +    chmod -R 777 /data
  +
  +ENV MPLCONFIGDIR /tmp/matplotlib
  +ENV PYTHONWARNINGS ignore
   
   # copy over the entrypoint script
  -COPY ./startfngs.sh /
   ADD ./.vimrc .vimrc
  +RUN ldconfig
  +RUN chmod -R 777 /usr/local/bin/ndmg_bids
   
   # and add it as an entrypoint
   ENTRYPOINT ["ndmg_bids"]
  
positive.code: #--------NDMG SETUP-----------------------------------------------------------#
  # setup of python dependencies for ndmg itself, as well as file dependencies
  RUN \
      pip install numpy==1.12.1 networkx>=1.11 nibabel>=2.0 dipy>=0.1 scipy \
      python-dateutil==2.6.1 boto3 awscli matplotlib==1.5.3 plotly==1.12.1 nilearn>=0.2 sklearn>=0.0 \
      pandas cython
  
  RUN \
      git clone -b m3r-release $NDMG_URL /ndmg && \
      cd /ndmg && \
      python setup.py install 
  
  
negative.code: 
  #--------Initial Configuration-----------------------------------------------#
  # download/install basic dependencies, and set up python
  RUN apt-get update && \
      apt-get install -y zip unzip vim git curl libglu1 python-setuptools zlib1g-dev \
      git libpng-dev libfreetype6-dev pkg-config g++ vim r-base-core libgsl0-dev build-essential \
      openssl
  
  # upgrade python to solve TLS issues
  RUN apt-get update && \
      apt-get install -y software-properties-common && \
      apt-get update && \
      add-apt-repository ppa:jonathonf/python-2.7 && \
      apt-get update && \
      apt-get install -y python2.7 python2.7-dev
  
  RUN wget https://bootstrap.pypa.io/get-pip.py && \
      python get-pip.py
  
  RUN pip install --upgrade pip
  
  #---------AFNI INSTALL--------------------------------------------------------#
  # setup of AFNI, which provides robust modifications of many of neuroimaging
  