anchor.diff:      CPATH="/usr/local/miniconda/include/:$CPATH" \
       LANG="C.UTF-8" \
       LC_ALL="C.UTF-8" \
  +    # PYTHONWARNINGS="ignore,default:::mriqc,default:::nipype" \
       PYTHONNOUSERSITE=1
   
   # Installing precomputed python packages
   RUN conda install -y python=3.7.1 \
  -                     mkl=2018.0.3 \
  -                     mkl-service \
  -                     numpy=1.15.4 \
  -                     scipy=1.1.0 \
  -                     scikit-learn=0.19.1 \
  -                     matplotlib=2.2.2 \
  -                     pandas=0.23.4 \
  +                     graphviz=2.40.1 \
                        libxml2=2.9.8 \
                        libxslt=1.1.32 \
  -                     graphviz=2.40.1 \
  +                     matplotlib=2.2.2 \
  +                     mkl-service \
  +                     mkl=2018.0.3 \
  +                     numpy=1.15.4 \
  +                     pandas=0.23.4 \
  +                     scikit-learn=0.19.1 \
  +                     scipy=1.1.0 \
  +                     setuptools>=40.0.0 \
                        traits=4.6.0 \
                        zlib; sync && \
       chmod -R a+rX /usr/local/miniconda; sync && \
  
positive.code: 
  RUN find $HOME -type d -exec chmod go=u {} + && \
      find $HOME -type f -exec chmod go=u {} +
  
  
  # Best practices
  RUN ldconfig
  
negative.code: RUN python -c "from matplotlib import font_manager" && \
      sed -i 's/\(backend *: \).*$/\1Agg/g' $( python -c "import matplotlib; print(matplotlib.matplotlib_fname())" )
  
  
  # Installing dev requirements (packages that are not in pypi)
  WORKDIR /src/
  COPY requirements.txt requirements.txt
  RUN pip install --no-cache-dir -r requirements.txt
  
  # Precaching atlases
  ENV TEMPLATEFLOW_HOME="/opt/templateflow"
  RUN mkdir -p $TEMPLATEFLOW_HOME
  RUN python -c "from templateflow import api as tfapi; \
                 tfapi.get('MNI152NLin2009cAsym')"
  
  # Installing MRIQC
  COPY . /src/mriqc
  