anchor.diff:  #
   # VERSION       0.1
   
  -FROM bgruening/galaxy-stable
  +FROM bgruening/galaxy-stable:dev
   
   MAINTAINER Björn A. Grüning, bjoern.gruening@gmail.com
   
  
positive.code: EXPOSE :21
  EXPOSE :8800
  EXPOSE :9001
  # 8000 is the standard SimpleHTTPServer Server port from python
  EXPOSE :8000
  
  # Autostart script that is invoked during container start
  CMD ["/usr/bin/startup"]
  
negative.code: 
  WORKDIR /galaxy-central
  
  # Install deepTools
  RUN install-repository \
      "--url https://testtoolshed.g2.bx.psu.edu/ -o bgruening --name deeptools --panel-section-name deepTools" \
  
  # Install bowtie2, fastqc
      "--url https://toolshed.g2.bx.psu.edu/ -o devteam --name bowtie2 --panel-section-id solexa_tools" \
      "--url https://toolshed.g2.bx.psu.edu/ -o devteam --name fastqc --panel-section-id NGS_QC"
  
  # Mark folders as imported from the host.
  VOLUME ["/export/", "/data/", "/var/lib/docker"]
  