anchor.diff:    wget http://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/bigWigToBedGraph && \
     chmod a+x bigWigToBedGraph
   
  -USER crunch
   
  
positive.code: 
  FROM arvados/jobs:latest
  
  
  USER root
  
  RUN apt-get update && \
    apt-get install -y build-essential golang libssl-dev \
      less wget \
      libncurses5-dev autoconf libbz2-dev liblzma-dev \
      cmake tabix libhts-dev parallel python-numpy 
  
  RUN mkdir -p /root/git && \
    cd /root/git && \
  
negative.code:   cd /root/git/samtools && \
    autoheader && autoconf -Wno-syntax && \
    ./configure && make && make install && \
  
    cd /root/git && \
    git clone https://github.com/vcftools/vcftools && \
    cd /root/git/vcftools && \
    ./autogen.sh && ./configure && make && make install && \
  
    cd /root/git/l7g/tools/misc && make && \
    cp /root/git/l7g/tools/misc/cleanvcf /usr/local/bin && \
  
    cd /root/git/l7g/tools/fjt && make && \
    cp /root/git/l7g/tools/fjt/fjt /usr/local/bin && \
  