anchor.diff:      && pip install --upgrade -r requirements.txt
   
   COPY shared/config/*.py /seqr_settings/
  -
  -RUN cd / \
  -    && git clone https://github.com/macarthur-lab/hail-elasticsearch-pipelines.git
   
   
   ENV PYTHONPATH="$PYTHONPATH:/seqr:/seqr_settings"
  
positive.code: COPY bashrc_custom /root/.bashrc_custom
  COPY entrypoint.sh /
  
  WORKDIR /seqr
  
  CMD [ "/entrypoint.sh" ]
  
negative.code:     && wget https://bootstrap.pypa.io/get-pip.py \
      && python get-pip.py
  
  # install ipython/jupyter notebooks
  RUN pip install --upgrade jupyter
  
  # install gsutil and other gcloud utils
  RUN CLOUDSDK_CORE_DISABLE_PROMPTS=1 \
      && curl https://sdk.cloud.google.com | bash \
      && apt-get install -y gcc python-dev python-setuptools libffi-dev libssl-dev \
  