anchor.diff:      "--url http://toolshed.g2.bx.psu.edu/ -o crs4 --name bwa_mem  --panel-section-name Mapping"
   
   
  +
   RUN ./install_repo_wrapper.sh \
  -    "--url http://testtoolshed.g2.bx.psu.edu/ -o iuc --name vt_variant_tools --panel-section-name VCFtools"
  +    "--url http://toolshed.g2.bx.psu.edu/ -o iuc --name vt_variant_tools --panel-section-name VCFtools"
   
   RUN ./install_repo_wrapper.sh \
       "--url http://toolshed.g2.bx.psu.edu/ -o anton --name suite_vcflib_tools_2_0 --panel-section-name VCFtools"
  
positive.code: 
  RUN sed -i 's|brand.*|brand = Exom Sequencing Pipeline|g' ~/galaxy-central/universe_wsgi.ini
  
  RUN DEBIAN_FRONTEND=noninteractive apt-get update
  RUN DEBIAN_FRONTEND=noninteractive apt-get install --no-install-recommends -y wget curl
  RUN DEBIAN_FRONTEND=noninteractive apt-get autoremove -y
  RUN DEBIAN_FRONTEND=noninteractive apt-get clean -y && rm -rf /var/lib/apt/lists/* /tmp/* /var/tmp/*
  
  
  WORKDIR /galaxy-central
  ADD ./install_repo_wrapper.sh /galaxy-central/install_repo_wrapper.sh
  RUN chmod +x ./install_repo_wrapper.sh
  
  # Install GATK2, samtools and 
  RUN ./install_repo_wrapper.sh \
      "--url http://testtoolshed.g2.bx.psu.edu/ -o iuc --name gatk2 --panel-section-name GATK2"
  RUN ./install_repo_wrapper.sh \
      "--url http://toolshed.g2.bx.psu.edu/ -o devteam --name suite_samtools_0_1_19 --panel-section-name SAMTools"
  RUN ./install_repo_wrapper.sh \
  
negative.code:     "--url http://toolshed.g2.bx.psu.edu/ -o devteam --name bowtie2 --panel-section-name Mapping"
  RUN ./install_repo_wrapper.sh \
      "--url http://toolshed.g2.bx.psu.edu/ -o devteam --name fastqc --panel-section-name QualityControl"
  
  RUN ./install_repo_wrapper.sh \
      "--url http://toolshed.g2.bx.psu.edu/ -o iuc --name package_pysam_0_7_7"
  RUN ./install_repo_wrapper.sh \
      "--url http://toolshed.g2.bx.psu.edu/ -o devteam --name package_libpng_1_6_7"
  RUN ./install_repo_wrapper.sh \
      "--url http://toolshed.g2.bx.psu.edu/ -o iuc --name package_freetype_2_4"
  RUN ./install_repo_wrapper.sh \
      "--url http://toolshed.g2.bx.psu.edu/ -o iuc --name package_numpy_1_7"
  RUN ./install_repo_wrapper.sh \
      "--url http://toolshed.g2.bx.psu.edu/ -o iuc --name package_scipy_0_12"
  RUN ./install_repo_wrapper.sh \
      "--url http://toolshed.g2.bx.psu.edu/ -o iuc --name package_matplotlib_1_2"
  RUN ./install_repo_wrapper.sh \
      "--url http://toolshed.g2.bx.psu.edu/ -o iuc --name package_bx_python_12_2013"
  
  
  
  RUN ./install_repo_wrapper.sh \
      "--url http://toolshed.g2.bx.psu.edu/ -o bgruening --name deeptools --panel-section-name deepTools"
  RUN ./install_repo_wrapper.sh \
  