anchor.diff:  	&& cd blatSrc \
   	&& make BINDIR=/usr/local/bin/ \
   	&& strip /usr/local/bin/blat \
  -	&& cd .. \
  -	&& rm -rf blatSrc blatSrc35.zip
  +	&& cd /root ; rm -rf blatSrc blatSrc35.zip
   
   ### install FragGeneScan from our patched source in github
   RUN cd /root \
  
positive.code: 	&& make \
  	&& make install \
  	&& make clean \
  	&& cd /root ; rm -rf /root/vsearch-2* 
  
  ### install CWL runner
  RUN pip install cwlref-runner
  
negative.code: # MG-RAST dockerfiles
  
  FROM debian
  MAINTAINER The MG-RAST team
  
  ENV DEBIAN_FRONTEND noninteractive
  