anchor.diff:  RUN time -v -o dragon-2.ripser-use-reduced.txt    ripser dragon_vrip.ply.txt_2000_.txt --format point-cloud --dim 1
   # RUN time -v -o genome.ripser-use-reduced.txt    ripser human_gene_distmat.txt --dim 1
   RUN time -v -o o3_1024.ripser-use-reduced.txt    ripser o3_1024.txt --format point-cloud --dim 3 --threshold 1.8 --ratio 2
  +RUN time -v -o o3_4096.ripser-use-reduced.txt    ripser o3_4096.txt --format point-cloud --dim 3 --threshold 1.4 --ratio 2
  +# RUN time -v -o clifford_torus_50000.ripser-use-reduced.txt    ripser clifford_torus_50000.points.txt --format point-cloud --dim 2 --threshold .15 --ratio 2
   
   
   FROM benchmark-setup as benchmark-gudhi
  
positive.code: RUN time -v -o dragon-2.ripser-store-reduced.txt    ripser dragon_vrip.ply.txt_2000_.txt --format point-cloud --dim 1
  # RUN time -v -o genome.ripser-store-reduced.txt    ripser human_gene_distmat.txt --dim 1
  RUN time -v -o o3_1024.ripser-store-reduced.txt    ripser o3_1024.txt --format point-cloud --dim 3 --threshold 1.8 --ratio 2
  
  
  FROM benchmark-ripser as benchmark-ripser-use-reduced
  
negative.code: RUN time -v -o dragon-2.ripser-no-emergent.txt    ripser dragon_vrip.ply.txt_2000_.txt --format point-cloud --dim 1
  # RUN time -v -o genome.ripser-no-emergent.txt    ripser human_gene_distmat.txt --dim 1
  RUN time -v -o o3_1024.ripser-no-emergent.txt    ripser o3_1024.txt --format point-cloud --dim 3 --threshold 1.8 --ratio 2
  RUN time -v -o o3_4096.ripser-no-emergent.txt    ripser o3_4096.txt --format point-cloud --dim 3 --threshold 1.4 --ratio 2
  RUN time -v -o clifford_torus_50000.ripser-no-emergent.txt    ripser clifford_torus_50000.points.txt --format point-cloud --dim 2 --threshold .15 --ratio 2
  
  
  FROM benchmark-ripser as benchmark-ripser-store-reduced
  