anchor.diff:  ## MiCall
   COPY micall_basespace.py /opt/micall/
   COPY micall/__init__.py micall/project* /opt/micall/micall/
  -COPY micall/core /opt/micall/micall/core/
  -COPY micall/g2p /opt/micall/micall/g2p/
  +
  +COPY micall/core    /opt/micall/micall/core/
  +COPY micall/g2p     /opt/micall/micall/g2p/
  +COPY micall/hivdb   /opt/micall/micall/hivdb/
   COPY micall/monitor /opt/micall/micall/monitor/
  -COPY micall/utils /opt/micall/micall/utils/
  +COPY micall/utils   /opt/micall/micall/utils/
  
positive.code: # Generate the Docker container to run MiCall on BaseSpace.
  FROM python:2.7
  
  MAINTAINER BC CfE in HIV/AIDS https://github.com/cfe-lab/MiCall
  
  
negative.code:   && rm -rf /var/lib/apt/lists/*
  
  ## Python packages, plus trigger matplotlib to build its font cache
  RUN pip install python-Levenshtein matplotlib requests reportlab && \
    python -c 'import matplotlib; matplotlib.use("Agg"); import matplotlib.pyplot'
  
  ## bowtie2
  