anchor.diff:  RUN \
       pip install numpy==1.12.1 networkx>=1.11 nibabel>=2.0 dipy>=0.1 scipy \
       boto3 awscli matplotlib==1.5.3 plotly==1.12.1 nilearn>=0.2 sklearn>=0.0 \
  -    pandas
  +    pandas cython
   
   RUN \
  -    git clone -b eric-dev-gkiar-fmri $NDMG_URL /ndmg && \
  +    git clone -b m3r-release $NDMG_URL /ndmg && \
       cd /ndmg && \
       python setup.py install 
   
  
positive.code: #--------Initial Configuration-----------------------------------------------#
  # download/install basic dependencies, and set up python
  RUN apt-get update
  RUN apt-get install -y zip unzip vim git python-dev curl gsl-bin
  
  RUN wget https://bootstrap.pypa.io/get-pip.py
  RUN python get-pip.py
  
negative.code:     cd /ndmg_atlases && \
      aws s3 cp --no-sign-request s3://mrneurodata/data/resources/ndmg_atlases.zip ./ && \
      unzip ndmg_atlases.zip
      wget -rnH --cut-dirs=3 --no-parent -P /ndmg_atlases $ATLASES && \
      unzip eric_atlases.zip
  
  
  # copy over the entrypoint script
  COPY ./startfngs.sh /
  