anchor.diff:  	libfile-slurp-perl \
   	libfilehandle-fmode-perl \
   	libgetopt-long-descriptive-perl \
  -	libjson-perl \
  +	libjson-perl 
  +	
  +RUN apt-get update && apt-get install -y \
   	liblist-allutils-perl \
   	libpq-dev \
   	libpng-dev \
  
positive.code: 	&& install -s -m555 diamond /usr/local/bin \
  	&& cd /root ; rm -rf /root/diamond
  	
  ### install vsearch 2.02
  RUN cd /root \
  	&& wget https://github.com/torognes/vsearch/archive/v2.0.2.tar.gz \
  	&& tar xzf v2.0.2.tar.gz \
  	&& cd vsearch-2.0.2 \
  	&& ./autogen.sh \
  	&& ./configure --prefix=/usr/local/ \
  	&& make \
  	&& make install \
  
negative.code: 	&& install -m755 -s fastq-join /usr/local/bin/ \
  	&& cd /root ; rm -rf /root/ea-utils
  
  ### install 
  RUN cd /root \
  	&& wget https://github.com/biocore/sortmerna/archive/2.1b.tar.gz \
  	&& tar xvf 2.1b.tar.gz \
  	&& cd sortmerna-2.1b \
  	&& ./configure &&  make install && make clean
  
  ### install simka
  #RUN cd /root \
  #	&& git clone https://github.com/GATB/simka.git \
  #	&& cd simka \
  #	&& sh INSTALL \
  
  
  