anchor.diff:  RUN mkdir /outputs && \
       chmod -R 777 /outputs
   
  -RUN git clone -b dev-dmri-fmri $NDMG_URL /ndmg && \
  +RUN git clone -b remove-zindex $NDMG_URL /ndmg && \
       cd /ndmg && \
  -    python setup.py install
  +    python3.6 setup.py install
   
   RUN mkdir /ndmg_atlases
   
  
positive.code: RUN apt-get update && \
      apt-get install -y software-properties-common && \
      apt-get update && \
      add-apt-repository ppa:jonathonf/python-2.7 && \
      apt-get update && \
      apt-get install -y python2.7 python2.7-dev
  
  RUN wget https://bootstrap.pypa.io/get-pip.py && \
      python get-pip.py
  
  RUN pip install --upgrade pip
  
  # Get neurodebian config
  RUN curl -sSL http://neuro.debian.net/lists/stretch.us-tn.full >> /etc/apt/sources.list.d/neurodebian.sources.list && \
  
negative.code:     apt-get update && \
      apt-get install -y git-lfs
  
  #--------NDMG SETUP-----------------------------------------------------------#
  # setup of python dependencies for ndmg itself, as well as file dependencies
  RUN \
      pip3.6 install numpy
  
  RUN \
      pip3.6 install networkx nibabel dipy scipy python-dateutil pandas boto3 awscli matplotlib nilearn sklearn pandas cython vtk pyvtk fury awscli requests scikit-image ipython duecredit
  
  RUN \
      pip3.6 install plotly==1.12.9 pybids==0.6.4 setuptools>=40.0
  
  WORKDIR /
  
  RUN mkdir /data && \
      chmod -R 777 /data
  