anchor.diff:  
   
   ### install jellyfish 2.2.6 from source (2.2.8 from repo is broken)
  -RUN cd /root \
  -    && wget -O jellyfish.tar.gz https://github.com/gmarcais/Jellyfish/releases/download/v2.2.6/jellyfish-2.2.6.tar.gz \
  -    && tar xfvz jellyfish.tar.gz \
  -    && rm -f jellyfish.tar.gz \
  -    && cd jelly*  \
  -    && ./configure \
  -    && make install \
  -    && cd /root \
  -    && rm -rf *jelly*
  +RUN apt install jellyfish
  +
  +# cd /root \
  +#     && wget -O jellyfish.tar.gz https://github.com/gmarcais/Jellyfish/releases/download/v2.3.0/jellyfish-2.3.0.tar.gz \
  +#     && tar xfvz jellyfish.tar.gz \
  +#     && rm -f jellyfish.tar.gz \
  +#     && cd jelly*  \
  +#     && ./configure \
  +#     && make install \
  +#     && cd /root \
  +#     && rm -rf *jelly*
   
   ### install latest prodigal release
   RUN cd /root \
  
positive.code:   && cd /root \
  	&& rm -rf sortmerna-2* 2*.tar.gz
  
  
  
  ### install skewer
  
negative.code: # MG-RAST pipeline Dockerfile
  
  FROM ubuntu:22.04
  LABEL Maintainer="wilke@anl.gov"
  ARG DEBIAN_FRONTEND=noninteractive
  
  RUN apt update -y 
  RUN apt-get install -y \
  	cdbfasta 	\
  	cd-hit		\
  	cmake       \
  