anchor.diff:  # 
   # The command at the end t/00_env.t sets up an environment including generating contaminated reads
   # for further unit testing.
  -RUN export SNVER=${SNVER:-0.11.5} && \
  +RUN export SNVER=${SNVER:-0.14.0} && \
    echo "SNVER is $SNVER" && \
    wget https://github.com/lskatz/SneakerNet/archive/v${SNVER}.tar.gz && \
    tar -zxf v${SNVER}.tar.gz && \
  
positive.code: ENV PATH="${PATH}:\
  /CG-Pipeline/scripts:\
  /KronaTools-2.7.1/bin:\
  /SneakerNet-${SNVER:-0.11.5}/scripts:/SneakerNet-${SNVER:-0.11.5}/SneakerNet.plugins:\
  /mlst-2.19.0/bin/:\
  /NGStools/KronaTools-2.7/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:\
  /NGStools/chewBBACA:/NGStools/chewBBACA/utils:/NGStools/prodigal_training_files:/NGStools/clustalw-2.1-linux-x86_64-libcppstatic:\
  
negative.code: 
  # SneakerNet version (corresponds to github version and $VERSION)
  # TODO I'd rather set this in .gitlab-ci.yml and so here is a parameter expansion format
  #ENV SNVER=${SNVER:-0.14.0}
  
  # Get SneakerNet and make /data
  # apt deps: sendmail-base zip bsdmainutils (for column command)
  