anchor.diff:  new = 0
   for (p in deps) {
      fn = paste0(p, "_", avail[p,"Version"], ".tar.gz")
  -   if (!file.exists(fn) || identical(tryCatch(packageVersion(p), error=function(e)FALSE), FALSE)) {
  +   if (!file.exists(fn) || 
  +       identical(tryCatch(packageVersion(p), error=function(e)FALSE), FALSE) ||
  +       packageVersion(p) != avail[p,"Version"]) {
        system(paste0("rm -f ", p, "*.tar.gz"))  # Remove previous *.tar.gz.  -f to be silent if not there (i.e. first time seeing this package)
        system(paste0("rm -rf ", p, ".Rcheck"))  # Remove last check (of previous version)
        if (!length(grep("bioc",avail[p,"Repository"]))) {
  
positive.code:    } else {
       old = old+1
     }
     if (packageVersion(p) != avail[p,"Version"])
         stop("Installed version of ",p," doesn't equal the previously downloaded tar.gz")
  }
  cat("New downloaded:",new," Already had latest:", old, " TOTAL:", length(deps), "\n")
  table(avail[deps,"Repository"])
  
negative.code: sudo apt-get -y install jags
  sudo apt-get -y install libmpfr-dev
  sudo apt-get -y install bwidget
  sudo apt-get -y install librsvg2-dev  # for rsvg
  sudo R CMD javareconf
  # ENDIF
  
  