def plot_temporal_distance_pdf(self, use_minutes=True, color="green", ax=None):
        """
        Plot the temporal distance probability density function.

        Returns
        -------
        fig: matplotlib.Figure
        """
        from matplotlib import pyplot as plt
        plt.rc('text', usetex=True)
        temporal_distance_split_points_ordered, densities, delta_peaks = self._temporal_distance_pdf()
        xs = []
        for i, x in enumerate(temporal_distance_split_points_ordered):
            xs.append(x)
            xs.append(x)
        xs = numpy.array(xs)
        ys = [0]
        for y in densities:
            ys.append(y)
            ys.append(y)
        ys.append(0)
        ys = numpy.array(ys)
        # convert data to minutes:
        xlabel = "Temporal distance (s)"
        ylabel = "Probability density (t)"
        if use_minutes:
            xs /= 60.0
            ys *= 60.0
            xlabel = "Temporal distance (min)"
            delta_peaks = {peak / 60.0: mass for peak, mass in delta_peaks.items()}

        if ax is None:
            fig = plt.figure()
            ax = fig.add_subplot(111)
        ax.plot(xs, ys, "k-")
        ax.fill_between(xs, ys, color="green", alpha=0.2)

        if delta_peaks:
            peak_height = max(ys) * 1.4
            max_x = max(xs)
            min_x = min(xs)
            now_max_x = max(xs) + 0.3 * (max_x - min_x)
            now_min_x = min_x - 0.1 * (max_x - min_x)

            text_x_offset = 0.1 * (now_max_x - max_x)

            for loc, mass in delta_peaks.items():
                ax.plot([loc, loc], [0, peak_height], color="green", lw=5)
                ax.text(loc + text_x_offset, peak_height * 0.99, "$P(\\mathrm{walk}) = %.2f$" % (mass), color="green")
            ax.set_xlim(now_min_x, now_max_x)

            tot_delta_peak_mass = sum(delta_peaks.values())
            transit_text_x = (min_x + max_x) / 2
            transit_text_y = min(ys[ys > 0]) / 2.
            ax.text(transit_text_x,
                    transit_text_y,
                    "$P(mathrm{PT}) = %.2f$" % (1 - tot_delta_peak_mass),
                    color="green",
                    va="center",
                    ha="center")

        ax.set_xlabel(xlabel)
        ax.set_ylabel(ylabel)
        ax.set_ylim(bottom=0)
        return ax.figure
def plot_temporal_distance_pdf(self, use_minutes=True, color="green", ax=None):
        """
        Plot the temporal distance probability density function.

        Returns
        -------
        fig: matplotlib.Figure
        """
        from matplotlib import pyplot as plt
        plt.rc('text', usetex=True)
        temporal_distance_split_points_ordered, densities, delta_peaks = self._temporal_distance_pdf()
        xs = []
        for i, x in enumerate(temporal_distance_split_points_ordered):
            xs.append(x)
            xs.append(x)
        xs = numpy.array(xs)
        ys = [0]
        for y in densities:
            ys.append(y)
            ys.append(y)
        ys.append(0)
        ys = numpy.array(ys)
        # convert data to minutes:
        xlabel = "Temporal distance (s)"
        ylabel = "Probability density (t)"
        if use_minutes:
            xs /= 60.0
            ys *= 60.0
            xlabel = "Temporal distance (min)"
            delta_peaks = {peak / 60.0: mass for peak, mass in delta_peaks.items()}

        if ax is None:
            fig = plt.figure()
            ax = fig.add_subplot(111)
        ax.plot(xs, ys, "k-")
        ax.fill_between(xs, ys, color="green", alpha=0.2)

        if delta_peaks:
            peak_height = max(ys) * 1.4
            max_x = max(xs)
            min_x = min(xs)
            now_max_x = max(xs) + 0.3 * (max_x - min_x)
            now_min_x = min_x - 0.1 * (max_x - min_x)

            text_x_offset = 0.1 * (now_max_x - max_x)

            for loc, mass in delta_peaks.items():
                ax.plot([loc, loc], [0, peak_height], color="green", lw=5)
                ax.text(loc + text_x_offset, peak_height * 0.99, "$P(\\mathrm{walk}) = %.2f$" % (mass), color="green")
            ax.set_xlim(now_min_x, now_max_x)

            tot_delta_peak_mass = sum(delta_peaks.values())
            transit_text_x = (min_x + max_x) / 2
            transit_text_y = min(ys[ys > 0]) / 2.
            ax.text(transit_text_x,
                    transit_text_y,
                    "$P(mathrm{PT}) = %.2f$" % (1 - tot_delta_peak_mass),
                    color="green",
                    va="center",
                    ha="center")

        ax.set_xlabel(xlabel)
        ax.set_ylabel(ylabel)
        ax.set_ylim(bottom=0)
        return ax.figure
def plot_temporal_distance_pdf ( self , use_minutes = True , color = "green" , ax = None ) : from matplotlib import pyplot as plt plt . rc ( 'text' , usetex = True ) temporal_distance_split_points_ordered , densities , delta_peaks = self . _temporal_distance_pdf ( ) xs = [ ] for i , x in enumerate ( temporal_distance_split_points_ordered ) : xs . append ( x ) xs . append ( x ) xs = numpy . array ( xs ) ys = [ 0 ] for y in densities : ys . append ( y ) ys . append ( y ) ys . append ( 0 ) ys = numpy . array ( ys ) # convert data to minutes: xlabel = "Temporal distance (s)" ylabel = "Probability density (t)" if use_minutes : xs /= 60.0 ys *= 60.0 xlabel = "Temporal distance (min)" delta_peaks = { peak / 60.0 : mass for peak , mass in delta_peaks . items ( ) } if ax is None : fig = plt . figure ( ) ax = fig . add_subplot ( 111 ) ax . plot ( xs , ys , "k-" ) ax . fill_between ( xs , ys , color = "green" , alpha = 0.2 ) if delta_peaks : peak_height = max ( ys ) * 1.4 max_x = max ( xs ) min_x = min ( xs ) now_max_x = max ( xs ) + 0.3 * ( max_x - min_x ) now_min_x = min_x - 0.1 * ( max_x - min_x ) text_x_offset = 0.1 * ( now_max_x - max_x ) for loc , mass in delta_peaks . items ( ) : ax . plot ( [ loc , loc ] , [ 0 , peak_height ] , color = "green" , lw = 5 ) ax . text ( loc + text_x_offset , peak_height * 0.99 , "$P(\\mathrm{walk}) = %.2f$" % ( mass ) , color = "green" ) ax . set_xlim ( now_min_x , now_max_x ) tot_delta_peak_mass = sum ( delta_peaks . values ( ) ) transit_text_x = ( min_x + max_x ) / 2 transit_text_y = min ( ys [ ys > 0 ] ) / 2. ax . text ( transit_text_x , transit_text_y , "$P(mathrm{PT}) = %.2f$" % ( 1 - tot_delta_peak_mass ) , color = "green" , va = "center" , ha = "center" ) ax . set_xlabel ( xlabel ) ax . set_ylabel ( ylabel ) ax . set_ylim ( bottom = 0 ) return ax . figure
Plot the temporal distance probability density function.

        Returns
        -------
        fig: matplotlib.Figure
Plot the temporal distance probability density function .