def parallel_gen_timestamps(dview, max_em_rate, bg_rate):
    """Generate timestamps from a set of remote simulations in `dview`.
    Assumes that all the engines have an `S` object already containing
    an emission trace (`S.em`). The "photons" timestamps are generated
    from these emission traces and merged into a single array of timestamps.
    `max_em_rate` and `bg_rate` are passed to `S.sim_timetrace()`.
    """
    dview.execute('S.sim_timestamps_em_store(max_rate=%d, bg_rate=%d, '
                  'seed=S.EID, overwrite=True)' % (max_em_rate, bg_rate))
    dview.execute('times = S.timestamps[:]')
    dview.execute('times_par = S.timestamps_par[:]')
    Times = dview['times']
    Times_par = dview['times_par']
    # Assuming all t_max equal, just take the first
    t_max = dview['S.t_max'][0]
    t_tot = np.sum(dview['S.t_max'])
    dview.execute("sim_name = S.compact_name_core(t_max=False, hashdigit=0)")
    # Core names contains no ID or t_max
    sim_name = dview['sim_name'][0]
    times_all, times_par_all = merge_ph_times(Times, Times_par,
                                              time_block=t_max)
    return times_all, times_par_all, t_tot, sim_name
def parallel_gen_timestamps(dview, max_em_rate, bg_rate):
    """Generate timestamps from a set of remote simulations in `dview`.
    Assumes that all the engines have an `S` object already containing
    an emission trace (`S.em`). The "photons" timestamps are generated
    from these emission traces and merged into a single array of timestamps.
    `max_em_rate` and `bg_rate` are passed to `S.sim_timetrace()`.
    """
    dview.execute('S.sim_timestamps_em_store(max_rate=%d, bg_rate=%d, '
                  'seed=S.EID, overwrite=True)' % (max_em_rate, bg_rate))
    dview.execute('times = S.timestamps[:]')
    dview.execute('times_par = S.timestamps_par[:]')
    Times = dview['times']
    Times_par = dview['times_par']
    # Assuming all t_max equal, just take the first
    t_max = dview['S.t_max'][0]
    t_tot = np.sum(dview['S.t_max'])
    dview.execute("sim_name = S.compact_name_core(t_max=False, hashdigit=0)")
    # Core names contains no ID or t_max
    sim_name = dview['sim_name'][0]
    times_all, times_par_all = merge_ph_times(Times, Times_par,
                                              time_block=t_max)
    return times_all, times_par_all, t_tot, sim_name
def parallel_gen_timestamps ( dview , max_em_rate , bg_rate ) : dview . execute ( 'S.sim_timestamps_em_store(max_rate=%d, bg_rate=%d, ' 'seed=S.EID, overwrite=True)' % ( max_em_rate , bg_rate ) ) dview . execute ( 'times = S.timestamps[:]' ) dview . execute ( 'times_par = S.timestamps_par[:]' ) Times = dview [ 'times' ] Times_par = dview [ 'times_par' ] # Assuming all t_max equal, just take the first t_max = dview [ 'S.t_max' ] [ 0 ] t_tot = np . sum ( dview [ 'S.t_max' ] ) dview . execute ( "sim_name = S.compact_name_core(t_max=False, hashdigit=0)" ) # Core names contains no ID or t_max sim_name = dview [ 'sim_name' ] [ 0 ] times_all , times_par_all = merge_ph_times ( Times , Times_par , time_block = t_max ) return times_all , times_par_all , t_tot , sim_name
Generate timestamps from a set of remote simulations in `dview`.
    Assumes that all the engines have an `S` object already containing
    an emission trace (`S.em`). The "photons" timestamps are generated
    from these emission traces and merged into a single array of timestamps.
    `max_em_rate` and `bg_rate` are passed to `S.sim_timetrace()`.
Generate timestamps from a set of remote simulations in dview . Assumes that all the engines have an S object already containing an emission trace ( S . em ) . The photons timestamps are generated from these emission traces and merged into a single array of timestamps . max_em_rate and bg_rate are passed to S . sim_timetrace () .