neurosynth/analysis/meta.py
def save_results(self, output_dir='.', prefix='', prefix_sep='_',
                     image_list=None):
        """ Write out any images generated by the meta-analysis.
        Args:
            output_dir (str): folder to write images to
            prefix (str): all image files will be prepended with this string
            prefix_sep (str): glue between the prefix and rest of filename
            image_list (list): optional list of images to save--e.g.,
                ['pFgA_z', 'pAgF']. If image_list is None (default), will save
                all images.
        """

        if prefix == '':
            prefix_sep = ''

        if not exists(output_dir):
            makedirs(output_dir)

        logger.debug("Saving results...")
        if image_list is None:
            image_list = self.images.keys()
        for suffix, img in self.images.items():
            if suffix in image_list:
                filename = prefix + prefix_sep + suffix + '.nii.gz'
                outpath = join(output_dir, filename)
                imageutils.save_img(img, outpath, self.dataset.masker)
def save_results(self, output_dir='.', prefix='', prefix_sep='_',
                     image_list=None):
        """ Write out any images generated by the meta-analysis.
        Args:
            output_dir (str): folder to write images to
            prefix (str): all image files will be prepended with this string
            prefix_sep (str): glue between the prefix and rest of filename
            image_list (list): optional list of images to save--e.g.,
                ['pFgA_z', 'pAgF']. If image_list is None (default), will save
                all images.
        """

        if prefix == '':
            prefix_sep = ''

        if not exists(output_dir):
            makedirs(output_dir)

        logger.debug("Saving results...")
        if image_list is None:
            image_list = self.images.keys()
        for suffix, img in self.images.items():
            if suffix in image_list:
                filename = prefix + prefix_sep + suffix + '.nii.gz'
                outpath = join(output_dir, filename)
                imageutils.save_img(img, outpath, self.dataset.masker)
def save_results ( self , output_dir = '.' , prefix = '' , prefix_sep = '_' , image_list = None ) : if prefix == '' : prefix_sep = '' if not exists ( output_dir ) : makedirs ( output_dir ) logger . debug ( "Saving results..." ) if image_list is None : image_list = self . images . keys ( ) for suffix , img in self . images . items ( ) : if suffix in image_list : filename = prefix + prefix_sep + suffix + '.nii.gz' outpath = join ( output_dir , filename ) imageutils . save_img ( img , outpath , self . dataset . masker )
Write out any images generated by the meta-analysis.
        Args:
            output_dir (str): folder to write images to
            prefix (str): all image files will be prepended with this string
            prefix_sep (str): glue between the prefix and rest of filename
            image_list (list): optional list of images to save--e.g.,
                ['pFgA_z', 'pAgF']. If image_list is None (default), will save
                all images.
Write out any images generated by the meta - analysis . Args : output_dir ( str ) : folder to write images to prefix ( str ) : all image files will be prepended with this string prefix_sep ( str ) : glue between the prefix and rest of filename image_list ( list ) : optional list of images to save -- e . g . [ pFgA_z pAgF ] . If image_list is None ( default ) will save all images .