@Test(expected = IllegalArgumentException.class) public void testContrastNeedsDisplayName() { testConfiguration( "<configuration experimentType=\"microarray_1colour_mrna_differential\">" + "<analytics>" + "<contrasts>" + "<contrast id=\"id\"></contrast>" + "</contrasts>" + "</analytics>" + "</configuration>" ).getContrasts(); }
public List<Contrast> getContrasts() { return getContrastAndAnnotationPairs().stream().map(Pair::getLeft).collect(Collectors.toList()); }
ExperimentConfiguration { public List<Contrast> getContrasts() { return getContrastAndAnnotationPairs().stream().map(Pair::getLeft).collect(Collectors.toList()); } }
ExperimentConfiguration { public List<Contrast> getContrasts() { return getContrastAndAnnotationPairs().stream().map(Pair::getLeft).collect(Collectors.toList()); } ExperimentConfiguration(XmlReader xmlReader); }
ExperimentConfiguration { public List<Contrast> getContrasts() { return getContrastAndAnnotationPairs().stream().map(Pair::getLeft).collect(Collectors.toList()); } ExperimentConfiguration(XmlReader xmlReader); List<Pair<Contrast, Boolean>> getContrastAndAnnotationPairs(); List<Contrast> getContrasts(); List<AssayGroup> getAssayGroups(); ExperimentType getExperimentType(); }
ExperimentConfiguration { public List<Contrast> getContrasts() { return getContrastAndAnnotationPairs().stream().map(Pair::getLeft).collect(Collectors.toList()); } ExperimentConfiguration(XmlReader xmlReader); List<Pair<Contrast, Boolean>> getContrastAndAnnotationPairs(); List<Contrast> getContrasts(); List<AssayGroup> getAssayGroups(); ExperimentType getExperimentType();  }