@Test public void testQline2() throws VCFParseException { VCFLine line = new VCFLine(qLine2); float q = line.getVariantPhredScore(); float delta = 0.001f; Assert.assertEquals(168.56, q, delta); }
public float getVariantPhredScore() { return this.phredScore; }
VCFLine { public float getVariantPhredScore() { return this.phredScore; } }
VCFLine { public float getVariantPhredScore() { return this.phredScore; } VCFLine(String line); }
VCFLine { public float getVariantPhredScore() { return this.phredScore; } VCFLine(String line); byte get_chromosome(); int get_position(); String get_reference_sequence(); String get_alternate_sequence(); GenotypeCall getGenotype(); float getVariantPhredScore(); static void setStoreVCFLines(); static void unsetStoreVCFLines(); static void setGenotypeFactory(GenotypeFactoryA fac); Variant toVariant(); void convertToAnnovar(); byte convertChromosomeStringToByteValue(String c); String getOriginalVCFLine(); }
VCFLine { public float getVariantPhredScore() { return this.phredScore; } VCFLine(String line); byte get_chromosome(); int get_position(); String get_reference_sequence(); String get_alternate_sequence(); GenotypeCall getGenotype(); float getVariantPhredScore(); static void setStoreVCFLines(); static void unsetStoreVCFLines(); static void setGenotypeFactory(GenotypeFactoryA fac); Variant toVariant(); void convertToAnnovar(); byte convertChromosomeStringToByteValue(String c); String getOriginalVCFLine();  }