@Test public void testAbstractCyNetworkReader() { assertNotNull(reader); }
public AbstractCyNetworkReader(final InputStream inputStream, final CyApplicationManager cyApplicationManager, final CyNetworkFactory cyNetworkFactory, final CyNetworkManager cyNetworkManager, final CyRootNetworkManager cyRootNetworkManager) { if (inputStream == null) throw new NullPointerException("Input stream is null"); if (cyApplicationManager == null) throw new NullPointerException("CyApplicationManager is null"); if (cyNetworkFactory == null) throw new NullPointerException("CyNetworkFactory is null"); if (cyRootNetworkManager == null) throw new NullPointerException("CyRootNetworkManager is null"); this.inputStream = inputStream; this.cyApplicationManager = cyApplicationManager; this.cyNetworkViewFactory = cyApplicationManager.getDefaultNetworkViewRenderer().getNetworkViewFactory(); this.cyNetworkFactory = cyNetworkFactory; this.cyNetworkManager = cyNetworkManager; this.cyRootNetworkManager = cyRootNetworkManager; this.cyApplicationManager = cyApplicationManager; init(); }
AbstractCyNetworkReader extends AbstractTask implements CyNetworkReader { public AbstractCyNetworkReader(final InputStream inputStream, final CyApplicationManager cyApplicationManager, final CyNetworkFactory cyNetworkFactory, final CyNetworkManager cyNetworkManager, final CyRootNetworkManager cyRootNetworkManager) { if (inputStream == null) throw new NullPointerException("Input stream is null"); if (cyApplicationManager == null) throw new NullPointerException("CyApplicationManager is null"); if (cyNetworkFactory == null) throw new NullPointerException("CyNetworkFactory is null"); if (cyRootNetworkManager == null) throw new NullPointerException("CyRootNetworkManager is null"); this.inputStream = inputStream; this.cyApplicationManager = cyApplicationManager; this.cyNetworkViewFactory = cyApplicationManager.getDefaultNetworkViewRenderer().getNetworkViewFactory(); this.cyNetworkFactory = cyNetworkFactory; this.cyNetworkManager = cyNetworkManager; this.cyRootNetworkManager = cyRootNetworkManager; this.cyApplicationManager = cyApplicationManager; init(); } }
AbstractCyNetworkReader extends AbstractTask implements CyNetworkReader { public AbstractCyNetworkReader(final InputStream inputStream, final CyApplicationManager cyApplicationManager, final CyNetworkFactory cyNetworkFactory, final CyNetworkManager cyNetworkManager, final CyRootNetworkManager cyRootNetworkManager) { if (inputStream == null) throw new NullPointerException("Input stream is null"); if (cyApplicationManager == null) throw new NullPointerException("CyApplicationManager is null"); if (cyNetworkFactory == null) throw new NullPointerException("CyNetworkFactory is null"); if (cyRootNetworkManager == null) throw new NullPointerException("CyRootNetworkManager is null"); this.inputStream = inputStream; this.cyApplicationManager = cyApplicationManager; this.cyNetworkViewFactory = cyApplicationManager.getDefaultNetworkViewRenderer().getNetworkViewFactory(); this.cyNetworkFactory = cyNetworkFactory; this.cyNetworkManager = cyNetworkManager; this.cyRootNetworkManager = cyRootNetworkManager; this.cyApplicationManager = cyApplicationManager; init(); } AbstractCyNetworkReader(final InputStream inputStream,
								   final CyApplicationManager cyApplicationManager,
								   final CyNetworkFactory cyNetworkFactory,
								   final CyNetworkManager cyNetworkManager,
								   final CyRootNetworkManager cyRootNetworkManager);  AbstractCyNetworkReader(final InputStream inputStream,
								   final CyNetworkViewFactory cyNetworkViewFactory,
								   final CyNetworkFactory cyNetworkFactory,
								   final CyNetworkManager cyNetworkManager,
								   final CyRootNetworkManager cyRootNetworkManager); }
AbstractCyNetworkReader extends AbstractTask implements CyNetworkReader { public AbstractCyNetworkReader(final InputStream inputStream, final CyApplicationManager cyApplicationManager, final CyNetworkFactory cyNetworkFactory, final CyNetworkManager cyNetworkManager, final CyRootNetworkManager cyRootNetworkManager) { if (inputStream == null) throw new NullPointerException("Input stream is null"); if (cyApplicationManager == null) throw new NullPointerException("CyApplicationManager is null"); if (cyNetworkFactory == null) throw new NullPointerException("CyNetworkFactory is null"); if (cyRootNetworkManager == null) throw new NullPointerException("CyRootNetworkManager is null"); this.inputStream = inputStream; this.cyApplicationManager = cyApplicationManager; this.cyNetworkViewFactory = cyApplicationManager.getDefaultNetworkViewRenderer().getNetworkViewFactory(); this.cyNetworkFactory = cyNetworkFactory; this.cyNetworkManager = cyNetworkManager; this.cyRootNetworkManager = cyRootNetworkManager; this.cyApplicationManager = cyApplicationManager; init(); } AbstractCyNetworkReader(final InputStream inputStream,
								   final CyApplicationManager cyApplicationManager,
								   final CyNetworkFactory cyNetworkFactory,
								   final CyNetworkManager cyNetworkManager,
								   final CyRootNetworkManager cyRootNetworkManager);  AbstractCyNetworkReader(final InputStream inputStream,
								   final CyNetworkViewFactory cyNetworkViewFactory,
								   final CyNetworkFactory cyNetworkFactory,
								   final CyNetworkManager cyNetworkManager,
								   final CyRootNetworkManager cyRootNetworkManager); @ProvidesTitle String getTitle(); @Tunable(description = "Network Collection:", groups = "_Network", gravity = 1.0) ListSingleSelection<String> getRootNetworkList(); void setRootNetworkList(final ListSingleSelection<String> roots); @Tunable(description = "Node Identifier Mapping Column:", groups = "_Network", gravity = 2.0, listenForChange = { "RootNetworkList" }) ListSingleSelection<String> getTargetColumnList(); void setTargetColumnList(ListSingleSelection<String> colList); @Tunable(description = "Network View Renderer:", groups = "_Network", gravity = 3.0) ListSingleSelection<NetworkViewRenderer> getNetworkViewRendererList(); void setNetworkViewRendererList(final ListSingleSelection<NetworkViewRenderer> rendererList); @Override CyNetwork[] getNetworks(); }
AbstractCyNetworkReader extends AbstractTask implements CyNetworkReader { public AbstractCyNetworkReader(final InputStream inputStream, final CyApplicationManager cyApplicationManager, final CyNetworkFactory cyNetworkFactory, final CyNetworkManager cyNetworkManager, final CyRootNetworkManager cyRootNetworkManager) { if (inputStream == null) throw new NullPointerException("Input stream is null"); if (cyApplicationManager == null) throw new NullPointerException("CyApplicationManager is null"); if (cyNetworkFactory == null) throw new NullPointerException("CyNetworkFactory is null"); if (cyRootNetworkManager == null) throw new NullPointerException("CyRootNetworkManager is null"); this.inputStream = inputStream; this.cyApplicationManager = cyApplicationManager; this.cyNetworkViewFactory = cyApplicationManager.getDefaultNetworkViewRenderer().getNetworkViewFactory(); this.cyNetworkFactory = cyNetworkFactory; this.cyNetworkManager = cyNetworkManager; this.cyRootNetworkManager = cyRootNetworkManager; this.cyApplicationManager = cyApplicationManager; init(); } AbstractCyNetworkReader(final InputStream inputStream,
								   final CyApplicationManager cyApplicationManager,
								   final CyNetworkFactory cyNetworkFactory,
								   final CyNetworkManager cyNetworkManager,
								   final CyRootNetworkManager cyRootNetworkManager);  AbstractCyNetworkReader(final InputStream inputStream,
								   final CyNetworkViewFactory cyNetworkViewFactory,
								   final CyNetworkFactory cyNetworkFactory,
								   final CyNetworkManager cyNetworkManager,
								   final CyRootNetworkManager cyRootNetworkManager); @ProvidesTitle String getTitle(); @Tunable(description = "Network Collection:", groups = "_Network", gravity = 1.0) ListSingleSelection<String> getRootNetworkList(); void setRootNetworkList(final ListSingleSelection<String> roots); @Tunable(description = "Node Identifier Mapping Column:", groups = "_Network", gravity = 2.0, listenForChange = { "RootNetworkList" }) ListSingleSelection<String> getTargetColumnList(); void setTargetColumnList(ListSingleSelection<String> colList); @Tunable(description = "Network View Renderer:", groups = "_Network", gravity = 3.0) ListSingleSelection<NetworkViewRenderer> getNetworkViewRendererList(); void setNetworkViewRendererList(final ListSingleSelection<NetworkViewRenderer> rendererList); @Override CyNetwork[] getNetworks();  }