The effects of hydrologic cycle change (caused by human activity and global climate change) on ecosystems attract the increasing attention around the world. As a result of impounding of the Three Gorges Dam (TGD), climate change and sand mining, the dry season of Poyang Lake and Dongting Lake (China's two largest freshwater lakes) came early after the TGD impoundment. It was the primary cause of the increasing need for sluice/dam construction to store water in the Lakes and attracted increasing attention. In this paper, we compared the landscape pattern between three hydrologic years with early dry season (EY) and three normal hydrologic years (NY) of each lake by remote sensing technology, to reveal the effect of early dry season on landscape pattern. The results showed that early dry season caused expanding of Phalaris to mudflat zone in Poyang Lake, while caused expanding of Carex to Phalaris zone and expanding of Phalaris to mudflat zone in Dongting Lake. In landscape level, there was no significant difference in landscape grain size, landscape grain shape, habitat connectivity and landscape diversity between EY and NY in the two lakes. While in habitat class level, there were significant changes in area of mudflat and Phalaris and grain size of mudflat in Poyang Lake, and in area of Carex, grain size of Phalaris and grain shape of Carex and Phalaris in Dongting Lake. These changes will impact migrating birds of East Asian and migratory fishes of Yangtze River. (C) 2016 Elsevier B.V. All rights reserved.