





import unittest

from transformers import AutoTokenizer, NystromformerConfig, is_torch_available
from transformers.testing_utils import require_torch, slow, torch_device

from ...test_configuration_common import ConfigTester
from ...test_modeling_common import ModelTesterMixin, ids_tensor, random_attention_mask
from ...test_pipeline_mixin import PipelineTesterMixin


if is_torch_available():
 import torch

 from transformers import (
     NystromformerForMaskedLM,
     NystromformerForMultipleChoice,
     NystromformerForQuestionAnswering,
     NystromformerForSequenceClassification,
     NystromformerForTokenClassification,
     NystromformerModel,
 )
 from transformers.models.nystromformer.modeling_nystromformer import NYSTROMFORMER_PRETRAINED_MODEL_ARCHIVE_LIST







class      lowerCamelCase:
     '''simple docstring'''


     def __init__(    self				,     snake_case_				,     snake_case_=13				,     snake_case_=7				,     snake_case_=True				,     snake_case_=True				,     snake_case_=True				,     snake_case_=True				,     snake_case_=99				,     snake_case_=32				,     snake_case_=5				,     snake_case_=4				,     snake_case_=37				,     snake_case_="gelu"				,     snake_case_=0.1				,     snake_case_=0.1				,     snake_case_=512				,     snake_case_=16				,     snake_case_=2				,     snake_case_=0.02				,     snake_case_=3				,     snake_case_=4				,     snake_case_=None				,     ):
         _A     =							parent
         _A     =							batch_size
         _A     =							seq_length
         _A     =							is_training
         _A     =							use_input_mask
         _A     =							use_token_type_ids
         _A     =							use_labels
         _A     =							vocab_size
         _A     =							hidden_size
         _A     =							num_hidden_layers
         _A     =							num_attention_heads
         _A     =							intermediate_size
         _A     =							hidden_act
         _A     =							hidden_dropout_prob
         _A     =							attention_probs_dropout_prob
         _A     =							max_position_embeddings
         _A     =							type_vocab_size
         _A     =							type_sequence_label_size
         _A     =							initializer_range
         _A     =							num_labels
         _A     =							num_choices
         _A     =							scope




     def        lowerCAmelCase__		(    self							):
         _A     =							ids_tensor([self.batch_size, self.seq_length]				,     self.vocab_size							)

         _A     =							None
         if self.use_input_mask:
             _A     =							random_attention_mask([self.batch_size, self.seq_length]							)

         _A     =							None
         if self.use_token_type_ids:
             _A     =							ids_tensor([self.batch_size, self.seq_length]				,     self.type_vocab_size							)

         _A     =							None
         _A     =							None
         _A     =							None
         if self.use_labels:
             _A     =							ids_tensor([self.batch_size]				,     self.type_sequence_label_size							)
             _A     =							ids_tensor([self.batch_size, self.seq_length]				,     self.num_labels							)
             _A     =							ids_tensor([self.batch_size]				,     self.num_choices							)

         _A     =							self.get_config()

         return config, input_ids, token_type_ids, input_mask, sequence_labels, token_labels, choice_labels




     def        lowerCAmelCase__		(    self							):
         return NystromformerConfig(
             vocab_size=self.vocab_size				,     hidden_size=self.hidden_size				,     num_hidden_layers=self.num_hidden_layers				,     num_attention_heads=self.num_attention_heads				,     intermediate_size=self.intermediate_size				,     hidden_act=self.hidden_act				,     hidden_dropout_prob=self.hidden_dropout_prob				,     attention_probs_dropout_prob=self.attention_probs_dropout_prob				,     max_position_embeddings=self.max_position_embeddings				,     type_vocab_size=self.type_vocab_size				,     is_decoder=snake_case_				,     initializer_range=self.initializer_range				,     )




     def        lowerCAmelCase__		(    self				,     snake_case_				,     snake_case_				,     snake_case_				,     snake_case_				,     snake_case_				,     snake_case_				,     snake_case_							):
         _A     =							NystromformerModel(config=snake_case_							)
         model.to(snake_case_							)
         model.eval()
         _A     =							model(snake_case_				,     attention_mask=snake_case_				,     token_type_ids=snake_case_							)
         _A     =							model(snake_case_				,     token_type_ids=snake_case_							)
         _A     =							model(snake_case_							)
         self.parent.assertEqual(result.last_hidden_state.shape				,     (self.batch_size, self.seq_length, self.hidden_size)							)




     def        lowerCAmelCase__		(    self				,     snake_case_				,     snake_case_				,     snake_case_				,     snake_case_				,     snake_case_				,     snake_case_				,     snake_case_							):
         _A     =							NystromformerForMaskedLM(config=snake_case_							)
         model.to(snake_case_							)
         model.eval()
         _A     =							model(snake_case_				,     attention_mask=snake_case_				,     token_type_ids=snake_case_				,     labels=snake_case_							)
         self.parent.assertEqual(result.logits.shape				,     (self.batch_size, self.seq_length, self.vocab_size)							)




     def        lowerCAmelCase__		(    self				,     snake_case_				,     snake_case_				,     snake_case_				,     snake_case_				,     snake_case_				,     snake_case_				,     snake_case_							):
         _A     =							NystromformerForQuestionAnswering(config=snake_case_							)
         model.to(snake_case_							)
         model.eval()
         _A     =							model(
             snake_case_				,     attention_mask=snake_case_				,     token_type_ids=snake_case_				,     start_positions=snake_case_				,     end_positions=snake_case_				,     )
         self.parent.assertEqual(result.start_logits.shape				,     (self.batch_size, self.seq_length)							)
         self.parent.assertEqual(result.end_logits.shape				,     (self.batch_size, self.seq_length)							)




     def        lowerCAmelCase__		(    self				,     snake_case_				,     snake_case_				,     snake_case_				,     snake_case_				,     snake_case_				,     snake_case_				,     snake_case_							):
         _A     =							self.num_labels
         _A     =							NystromformerForSequenceClassification(snake_case_							)
         model.to(snake_case_							)
         model.eval()
         _A     =							model(snake_case_				,     attention_mask=snake_case_				,     token_type_ids=snake_case_				,     labels=snake_case_							)
         self.parent.assertEqual(result.logits.shape				,     (self.batch_size, self.num_labels)							)




     def        lowerCAmelCase__		(    self				,     snake_case_				,     snake_case_				,     snake_case_				,     snake_case_				,     snake_case_				,     snake_case_				,     snake_case_							):
         _A     =							self.num_labels
         _A     =							NystromformerForTokenClassification(config=snake_case_							)
         model.to(snake_case_							)
         model.eval()
         _A     =							model(snake_case_				,     attention_mask=snake_case_				,     token_type_ids=snake_case_				,     labels=snake_case_							)
         self.parent.assertEqual(result.logits.shape				,     (self.batch_size, self.seq_length, self.num_labels)							)




     def        lowerCAmelCase__		(    self				,     snake_case_				,     snake_case_				,     snake_case_				,     snake_case_				,     snake_case_				,     snake_case_				,     snake_case_							):
         _A     =							self.num_choices
         _A     =							NystromformerForMultipleChoice(config=snake_case_							)
         model.to(snake_case_							)
         model.eval()
         _A     =							input_ids.unsqueeze(1							).expand(-1				,     self.num_choices				,     -1							).contiguous()
         _A     =							token_type_ids.unsqueeze(1							).expand(-1				,     self.num_choices				,     -1							).contiguous()
         _A     =							input_mask.unsqueeze(1							).expand(-1				,     self.num_choices				,     -1							).contiguous()
         _A     =							model(
             snake_case_				,     attention_mask=snake_case_				,     token_type_ids=snake_case_				,     labels=snake_case_				,     )
         self.parent.assertEqual(result.logits.shape				,     (self.batch_size, self.num_choices)							)




     def        lowerCAmelCase__		(    self							):
         _A     =							self.prepare_config_and_inputs()
         (
             (
             _A
         ),			(
             _A
         ),			(
             _A
         ),			(
             _A
         ),			(
             _A
         ),			(
             _A
         ),			(
             _A
         ),			
         )     =							config_and_inputs
         _A     =							{'input_ids': input_ids, 'token_type_ids': token_type_ids, 'attention_mask': input_mask}
         return config, inputs_dict







@require_torch
class      lowerCamelCase(						__snake_case			, __snake_case			, unittest.TestCase	):
     '''simple docstring'''


     __magic_name__   =			(
         (
             NystromformerModel,
             NystromformerForMaskedLM,
             NystromformerForMultipleChoice,
             NystromformerForQuestionAnswering,
             NystromformerForSequenceClassification,
             NystromformerForTokenClassification,
         )
         if is_torch_available()
         else ()
     )
     __magic_name__   =			(
         {
             'feature-extraction': NystromformerModel,
             'fill-mask': NystromformerForMaskedLM,
             'question-answering': NystromformerForQuestionAnswering,
             'text-classification': NystromformerForSequenceClassification,
             'token-classification': NystromformerForTokenClassification,
             'zero-shot': NystromformerForSequenceClassification,
         }
         if is_torch_available()
         else {}
     )
     __magic_name__   =			False
     __magic_name__   =			False




     def        lowerCAmelCase__		(    self							):
         _A     =							NystromformerModelTester(self							)
         _A     =							ConfigTester(self				,     config_class=snake_case_				,     hidden_size=37							)




     def        lowerCAmelCase__		(    self							):
         self.config_tester.run_common_tests()




     def        lowerCAmelCase__		(    self							):
         _A     =							self.model_tester.prepare_config_and_inputs()
         self.model_tester.create_and_check_model(*snake_case_							)




     def        lowerCAmelCase__		(    self							):
         _A     =							self.model_tester.prepare_config_and_inputs()
         for type in ["absolute", "relative_key", "relative_key_query"]:
             _A     =							type
             self.model_tester.create_and_check_model(*snake_case_							)




     def        lowerCAmelCase__		(    self							):
         _A     =							self.model_tester.prepare_config_and_inputs()
         self.model_tester.create_and_check_for_masked_lm(*snake_case_							)




     def        lowerCAmelCase__		(    self							):
         _A     =							self.model_tester.prepare_config_and_inputs()
         self.model_tester.create_and_check_for_multiple_choice(*snake_case_							)




     def        lowerCAmelCase__		(    self							):
         _A     =							self.model_tester.prepare_config_and_inputs()
         self.model_tester.create_and_check_for_question_answering(*snake_case_							)




     def        lowerCAmelCase__		(    self							):
         _A     =							self.model_tester.prepare_config_and_inputs()
         self.model_tester.create_and_check_for_sequence_classification(*snake_case_							)




     def        lowerCAmelCase__		(    self							):
         _A     =							self.model_tester.prepare_config_and_inputs()
         self.model_tester.create_and_check_for_token_classification(*snake_case_							)




     @slow
     def        lowerCAmelCase__		(    self							):
         for model_name in NYSTROMFORMER_PRETRAINED_MODEL_ARCHIVE_LIST[:1]:
             _A     =							NystromformerModel.from_pretrained(snake_case_							)
             self.assertIsNotNone(snake_case_							)







@require_torch
class      lowerCamelCase(						unittest.TestCase	):
     '''simple docstring'''


     @slow
     def        lowerCAmelCase__		(    self							):
         _A     =							NystromformerModel.from_pretrained('uw-madison/nystromformer-512'							)
         _A     =							torch.tensor([[0, 1, 2, 3, 4, 5]]							)

         with torch.no_grad():
             _A     =							model(snake_case_							)[0]

         _A     =							torch.Size((1, 6, 768)							)
         self.assertEqual(output.shape				,     snake_case_							)

         _A     =							torch.tensor(
             [[[-0.4532, -0.0936, 0.5137], [-0.2676, 0.0628, 0.6186], [-0.3629, -0.1726, 0.4716]]]							)

         self.assertTrue(torch.allclose(output[:, :3, :3]				,     snake_case_				,     atol=1E-4							)							)




     @slow
     def        lowerCAmelCase__		(    self							):
         _A     =							'the [MASK] of Belgium is Brussels'

         _A     =							AutoTokenizer.from_pretrained('uw-madison/nystromformer-512'							)
         _A     =							NystromformerForMaskedLM.from_pretrained('uw-madison/nystromformer-512'							)

         _A     =							tokenizer(snake_case_				,     return_tensors='pt'							)

         with torch.no_grad():
             _A     =							model(encoding.input_ids							).logits

         _A     =							token_logits[:, 2, :].argmax(-1							)[0]

         self.assertEqual(tokenizer.decode(snake_case_							)				,     'capital'							)












from __future__ import annotations

import unittest

from transformers import EsmConfig, is_tf_available
from transformers.testing_utils import require_tf, slow

from ...test_configuration_common import ConfigTester
from ...test_modeling_tf_common import TFModelTesterMixin, floats_tensor, ids_tensor, random_attention_mask
from ...test_pipeline_mixin import PipelineTesterMixin


if is_tf_available():
 import numpy
 import tensorflow as tf

 from transformers.models.esm.modeling_tf_esm import (
     TF_ESM_PRETRAINED_MODEL_ARCHIVE_LIST,
     TFEsmForMaskedLM,
     TFEsmForSequenceClassification,
     TFEsmForTokenClassification,
     TFEsmModel,
 )







class      lowerCamelCase:
     '''simple docstring'''


     def __init__(    self				,     snake_case_				,     ):
         _A     =							parent
         _A     =							13
         _A     =							7
         _A     =							True
         _A     =							True
         _A     =							True
         _A     =							99
         _A     =							32
         _A     =							2
         _A     =							4
         _A     =							37
         _A     =							'gelu'
         _A     =							0.1
         _A     =							0.1
         _A     =							512
         _A     =							16
         _A     =							2
         _A     =							0.02
         _A     =							3
         _A     =							4
         _A     =							None




     def        lowerCAmelCase__		(    self							):
         _A     =							ids_tensor([self.batch_size, self.seq_length]				,     self.vocab_size							)

         _A     =							None
         if self.use_input_mask:
             _A     =							random_attention_mask([self.batch_size, self.seq_length]							)

         _A     =							None
         _A     =							None
         _A     =							None
         if self.use_labels:
             _A     =							ids_tensor([self.batch_size]				,     self.type_sequence_label_size							)
             _A     =							ids_tensor([self.batch_size, self.seq_length]				,     self.num_labels							)
             _A     =							ids_tensor([self.batch_size]				,     self.num_choices							)

         _A     =							EsmConfig(
             vocab_size=self.vocab_size				,     hidden_size=self.hidden_size				,     num_hidden_layers=self.num_hidden_layers				,     pad_token_id=1				,     num_attention_heads=self.num_attention_heads				,     intermediate_size=self.intermediate_size				,     hidden_act=self.hidden_act				,     hidden_dropout_prob=self.hidden_dropout_prob				,     attention_probs_dropout_prob=self.attention_probs_dropout_prob				,     max_position_embeddings=self.max_position_embeddings				,     type_vocab_size=self.type_vocab_size				,     initializer_range=self.initializer_range				,     )

         return config, input_ids, input_mask, sequence_labels, token_labels, choice_labels




     def        lowerCAmelCase__		(    self							):
         (
             (
             _A
         ),			(
             _A
         ),			(
             _A
         ),			(
             _A
         ),			(
             _A
         ),			(
             _A
         ),			
         )     =							self.prepare_config_and_inputs()

         _A     =							True
         _A     =							floats_tensor([self.batch_size, self.seq_length, self.hidden_size]							)
         _A     =							ids_tensor([self.batch_size, self.seq_length]				,     vocab_size=2							)

         return (
             config,
             input_ids,
             input_mask,
             sequence_labels,
             token_labels,
             choice_labels,
             encoder_hidden_states,
             encoder_attention_mask,
         )




     def        lowerCAmelCase__		(    self				,     snake_case_				,     snake_case_				,     snake_case_				,     snake_case_				,     snake_case_				,     snake_case_							):
         _A     =							TFEsmModel(config=snake_case_							)
         _A     =							{'input_ids': input_ids, 'attention_mask': input_mask}
         _A     =							model(snake_case_							)

         _A     =							[input_ids, input_mask]
         _A     =							model(snake_case_							)

         _A     =							model(snake_case_							)

         self.parent.assertEqual(result.last_hidden_state.shape				,     (self.batch_size, self.seq_length, self.hidden_size)							)




     def        lowerCAmelCase__		(    self				,     snake_case_				,     snake_case_				,     snake_case_				,     snake_case_				,     snake_case_				,     snake_case_				,     snake_case_				,     snake_case_				,     ):
         _A     =							True

         _A     =							TFEsmModel(config=snake_case_							)
         _A     =							{
             'input_ids': input_ids,
             'attention_mask': input_mask,
             'encoder_hidden_states': encoder_hidden_states,
             'encoder_attention_mask': encoder_attention_mask,
         }
         _A     =							model(snake_case_							)

         _A     =							[input_ids, input_mask]
         _A     =							model(snake_case_				,     encoder_hidden_states=snake_case_							)

         # Also check the case where encoder outputs are not passed
         _A     =							model(snake_case_				,     attention_mask=snake_case_							)

         self.parent.assertEqual(result.last_hidden_state.shape				,     (self.batch_size, self.seq_length, self.hidden_size)							)




     def        lowerCAmelCase__		(    self				,     snake_case_				,     snake_case_				,     snake_case_				,     snake_case_				,     snake_case_				,     snake_case_							):
         _A     =							TFEsmForMaskedLM(config=snake_case_							)
         _A     =							model([input_ids, input_mask]							)
         self.parent.assertEqual(result.logits.shape				,     (self.batch_size, self.seq_length, self.vocab_size)							)




     def        lowerCAmelCase__		(    self				,     snake_case_				,     snake_case_				,     snake_case_				,     snake_case_				,     snake_case_				,     snake_case_							):
         _A     =							self.num_labels
         _A     =							TFEsmForTokenClassification(config=snake_case_							)
         _A     =							{'input_ids': input_ids, 'attention_mask': input_mask}
         _A     =							model(snake_case_							)
         self.parent.assertEqual(result.logits.shape				,     (self.batch_size, self.seq_length, self.num_labels)							)




     def        lowerCAmelCase__		(    self							):
         _A     =							self.prepare_config_and_inputs()
         (
             (
             _A
         ),			(
             _A
         ),			(
             _A
         ),			(
             _A
         ),			(
             _A
         ),			(
             _A
         ),			
         )     =							config_and_inputs
         _A     =							{'input_ids': input_ids, 'attention_mask': input_mask}
         return config, inputs_dict







@require_tf
class      lowerCamelCase(						__snake_case			, __snake_case			, unittest.TestCase	):
     '''simple docstring'''


     __magic_name__   =			(
         (
             TFEsmModel,
             TFEsmForMaskedLM,
             TFEsmForSequenceClassification,
             TFEsmForTokenClassification,
         )
         if is_tf_available()
         else ()
     )
     __magic_name__   =			(
         {
             'feature-extraction': TFEsmModel,
             'fill-mask': TFEsmForMaskedLM,
             'text-classification': TFEsmForSequenceClassification,
             'token-classification': TFEsmForTokenClassification,
             'zero-shot': TFEsmForSequenceClassification,
         }
         if is_tf_available()
         else {}
     )
     __magic_name__   =			False
     __magic_name__   =			False




     def        lowerCAmelCase__		(    self							):
         _A     =							TFEsmModelTester(self							)
         _A     =							ConfigTester(self				,     config_class=snake_case_				,     hidden_size=37							)




     def        lowerCAmelCase__		(    self							):
         self.config_tester.run_common_tests()




     def        lowerCAmelCase__		(    self							):
         _A     =							self.model_tester.prepare_config_and_inputs()
         self.model_tester.create_and_check_model(*snake_case_							)




     def        lowerCAmelCase__		(    self							):
         _A     =							self.model_tester.prepare_config_and_inputs_for_decoder()
         self.model_tester.create_and_check_model_as_decoder(*snake_case_							)




     def        lowerCAmelCase__		(    self							):
         _A     =							self.model_tester.prepare_config_and_inputs()
         self.model_tester.create_and_check_for_masked_lm(*snake_case_							)




     def        lowerCAmelCase__		(    self							):
         _A     =							self.model_tester.prepare_config_and_inputs()
         self.model_tester.create_and_check_for_token_classification(*snake_case_							)




     @slow
     def        lowerCAmelCase__		(    self							):
         for model_name in TF_ESM_PRETRAINED_MODEL_ARCHIVE_LIST[:1]:
             _A     =							TFEsmModel.from_pretrained(snake_case_							)
             self.assertIsNotNone(snake_case_							)




     @unittest.skip('Protein models do not support embedding resizing.'							)
     def        lowerCAmelCase__		(    self							):
         pass




     @unittest.skip('Protein models do not support embedding resizing.'							)
     def        lowerCAmelCase__		(    self							):
         pass




     def        lowerCAmelCase__		(    self							):
         _A,			_A     =							self.model_tester.prepare_config_and_inputs_for_common()

         for model_class in self.all_model_classes:
             _A     =							model_class(snake_case_							)
             assert isinstance(model.get_input_embeddings()				,     tf.keras.layers.Layer							)
             if model_class is TFEsmForMaskedLM:
                 # Output embedding test differs from the main test because they're a matrix, not a layer
                 _A     =							model.get_bias()
                 assert isinstance(snake_case_				,     snake_case_							)
                 for k, v in name.items():
                     assert isinstance(snake_case_				,     tf.Variable							)
             else:
                 _A     =							model.get_output_embeddings()
                 assert x is None
                 _A     =							model.get_bias()
                 assert name is None







@require_tf
class      lowerCamelCase(						unittest.TestCase	):
     '''simple docstring'''


     @slow
     def        lowerCAmelCase__		(    self							):
         _A     =							TFEsmForMaskedLM.from_pretrained('facebook/esm2_t6_8M_UR50D'							)

         _A     =							tf.constant([[0, 1, 2, 3, 4, 5]]							)
         _A     =							model(snake_case_							)[0]
         _A     =							[1, 6, 33]
         self.assertEqual(list(output.numpy().shape							)				,     snake_case_							)
         # compare the actual values for a slice.
         _A     =							tf.constant(
             [
                 [
                     [8.92_1518, -10.58_9814, -6.467_1307],
                     [-6.396_7156, -13.91_1377, -1.121_1915],
                     [-7.78_1247, -13.95_1557, -3.74_0592],
                 ]
             ]							)
         self.assertTrue(numpy.allclose(output[:, :3, :3].numpy()				,     expected_slice.numpy()				,     atol=1E-2							)							)




     @slow
     def        lowerCAmelCase__		(    self							):
         _A     =							TFEsmModel.from_pretrained('facebook/esm2_t6_8M_UR50D'							)

         _A     =							tf.constant([[0, 6, 4, 13, 5, 4, 16, 12, 11, 7, 2]]							)
         _A     =							model(snake_case_							)[0]
         # compare the actual values for a slice.
         _A     =							tf.constant(
             [
                 [
                     [0.1444_3092, 0.5412_5327, 0.324_7739],
                     [0.3034_0484, 0.0052_6676, 0.3107_7722],
                     [0.3227_8043, -0.2498_7096, 0.341_4628],
                 ]
             ]							)
         self.assertTrue(numpy.allclose(output[:, :3, :3].numpy()				,     expected_slice.numpy()				,     atol=1E-4							)							)





