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license: mit
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license: mit
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---
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# Otter DUDe Dataset Card
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Otter DUDe includes 1,452,568 instances of drug-target interactions.
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## Dataset details
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#### DUDe
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DUDe comprises a collection of 22,886 active compounds and their corresponding affinities towards 102 targets. For our study, we utilized a preprocessed version of the DUDe \cite{sledzieski2022adapting}, which includes 1,452,568 instances of drug-target interactions. To prevent any data leakage, we eliminated the negative interactions and the overlapping triples with the TDC DTI dataset. As a result, we were left with a total of 40,216 drug-target interaction pairs.
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**Paper or resources for more information:**
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- [GitHub Repo](https://github.com/IBM/otter-knowledge)
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**License:**
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MIT
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**Where to send questions or comments about the dataset:**
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- [GitHub Repo](https://github.com/IBM/otter-knowledge)
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**Models trained on Otter UBC**
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- [ibm/otter_dude_classifier](https://huggingface.co/ibm/otter_dude_classifier)
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- [ibm/otter_dude_distmult](https://huggingface.co/ibm/otter_dude_distmult)
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- [ibm/otter_dude_transe](https://huggingface.co/ibm/otter_dude_transe)
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