A number of quad bikes, motorbikes and other equipment were taken during the raids in the west end and Peterculter areas of the city.
Police said the incidents happened between Monday 2 January and Thursday 5 January.
The arrested men are expected to appear at Aberdeen Sheriff Court.
Three men aged 17, 19 and 22 are to appear in court following a series of break-ins and attempted break-ins at garages in Aberdeen.