More mothers now need surgery to deliver a baby due to their narrow pelvis size, according to a study.
Researchers estimate cases where the baby cannot fit down the birth canal have increased from 30 in 1,000 in the 1960s to 36 in 1,000 births today.
Historically, these genes would not have been passed from mother to child as both would have died in labour.
Researchers in Austria say the trend is likely to continue, but not to the extent that non-surgical births will become obsolete.
Dr Philipp Mitteroecker, of the department of theoretical biology at the University of Vienna, said there was a long standing question in the understanding of human evolution.
"Why is the rate of birth problems, in particular what we call fetopelvic disproportion - basically that the baby doesn't fit through the maternal birth canal - why is this rate so high?" he said.
"Without modern medical intervention such problems often were lethal and this is, from an evolutionary perspective, selection.
"Women with a very narrow pelvis would not have survived birth 100 years ago. They do now and pass on their genes encoding for a narrow pelvis to their daughters."
It has been a long standing evolutionary question why the human pelvis has not grown wider over the years.
The head of a human baby is large compared with other primates, meaning animals such as chimps can give birth relatively easily.
The researchers devised a mathematical model using data from the World Health Organization and other large birth studies.
They found opposing evolutionary forces in their theoretical study.
One is a trend towards larger newborns, which are more healthy.
However, if they grow too large, they get stuck during labour, which historically would have proved disastrous for mother and baby, and their genes would not be passed on.
"One side of this selective force - namely the trend towards smaller babies - has vanished due to Caesarean sections," said Dr Mitteroecker.
"Our intent is not to criticise medical intervention," he said. "But it's had an evolutionary effect. "
The researchers estimated that the global rate of cases where the baby could not fit through the maternal birth canal was 3%, or 30 in 1,000 births.
Over the past 50 or 60 years, this rate has increased to about 3.3-3.6%, so up to 36 in 1,000 births.
That is about a 10-20% increase of the original rate, due to the evolutionary effect.
"The pressing question is what's going to happen in the future?" Dr Mitteroecker said.
"I expect that this evolutionary trend will continue but perhaps only slightly and slowly.
"There are limits to that. So I don't expect that one day the majority of children will have to be born by [Caesarean] sections."
The research is published in the journal, Proceedings of the National Academy of Sciences.
Commenting on the study, Smithsonian paleoanthropologist Dr Briana Pobiner said there are "probably many other biological and cultural issues that factor into the Caesarean sections rate, which varies widely across the developed and developing world".
And Daghni Rajasingam, a consultant obstetrician and a spokesman for the Royal College of Obstetricians, said factors such as diabetes and obesity, are having an impact on the number of Caesarean sections.
"I think what is important to take into the [question of] evolution is that things like diabetes are much more common at a younger age so we see many more women of reproductive age who have diabetes," she said.
"That has consequences as to whether or not they may need a caesarean section.
"In addition, the rates of obesity are increasing so more and more women of reproductive age have a higher body mass index and this again has an impact on caesarean section rates."
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The regular use of Caesarean sections is having an impact on human evolution, say scientists.