scripts/parse_vcgs_manifest.py
def sequence_meta_map():
        """Columns that will be put into sequence.meta"""
        fields = [
            Columns.LIBRARY_ID,
            Columns.LIBRARY_STRATEGY,
            Columns.LIBRARY_SOURCE,
            Columns.LIBRARY_SELECTION,
            Columns.LIBRARY_LAYOUT,
            Columns.PLATFORM,
            Columns.INSTRUMENT_MODEL,
            Columns.DESIGN_DESCRIPTION,
            Columns.REFERENCE_GENOME_ASSEMBLY,
            Columns.FORWARD_READ_LENGTH,
            Columns.REVERSE_READ_LENGTH,
        ]
        return {k: k for k in fields}
Columns that will be put into sequence.meta
Columns that will be put into sequence.meta
Columns that will be put into sequence . meta
def sequence_meta_map():
        fields = [
            Columns.LIBRARY_ID,
            Columns.LIBRARY_STRATEGY,
            Columns.LIBRARY_SOURCE,
            Columns.LIBRARY_SELECTION,
            Columns.LIBRARY_LAYOUT,
            Columns.PLATFORM,
            Columns.INSTRUMENT_MODEL,
            Columns.DESIGN_DESCRIPTION,
            Columns.REFERENCE_GENOME_ASSEMBLY,
            Columns.FORWARD_READ_LENGTH,
            Columns.REVERSE_READ_LENGTH,
        ]
        return {k: k for k in fields}
def sequence_meta_map ( ) : fields = [ Columns . LIBRARY_ID , Columns . LIBRARY_STRATEGY , Columns . LIBRARY_SOURCE , Columns . LIBRARY_SELECTION , Columns . LIBRARY_LAYOUT , Columns . PLATFORM , Columns . INSTRUMENT_MODEL , Columns . DESIGN_DESCRIPTION , Columns . REFERENCE_GENOME_ASSEMBLY , Columns . FORWARD_READ_LENGTH , Columns . REVERSE_READ_LENGTH , ] return { k : k for k in fields }
Columns that will be put into sequence.meta
Columns that will be put into sequence . meta
"""Columns that will be put into sequence.meta"""