Scripts/Start_job.py
def write_bedgraphfile(chromosome):
    """ The write_bedgraphfile function runs the softclipp_graph.py script for the given chromosome with the given
    arguments

    :param chromosome: Int or Str specifying the chromosome.
    """
    if not os.path.exists(f"{args.output}/{args.name}_{chromosome}.BedGraph"):
        os.system(f'python3 softclip_graph.py -b "{args.bam}"'
                  f' -o "{args.output}"'
                  f' -r "chr{chromosome}"'
                  f' -n "{args.name}_{chromosome}"')
 The write_bedgraphfile function runs the softclipp_graph.py script for the given chromosome with the given
    arguments

    :param chromosome: Int or Str specifying the chromosome.
    
The write_bedgraphfile function runs the softclipp_graph.py script for the given chromosome with the given
arguments
The write_bedgraphfile function runs the softclipp_graph . py script for the given chromosome with the given arguments
def write_bedgraphfile(chromosome):
    if not os.path.exists(f"{args.output}/{args.name}_{chromosome}.BedGraph"):
        os.system(f'python3 softclip_graph.py -b "{args.bam}"'
                  f' -o "{args.output}"'
                  f' -r "chr{chromosome}"'
                  f' -n "{args.name}_{chromosome}"')
def write_bedgraphfile ( chromosome ) : if not os . path . exists ( f"{args.output}/{args.name}_{chromosome}.BedGraph" ) : os . system ( f'python3 softclip_graph.py -b "{args.bam}"' f' -o "{args.output}"' f' -r "chr{chromosome}"' f' -n "{args.name}_{chromosome}"' )
The write_bedgraphfile function runs the softclipp_graph.py script for the given chromosome with the given
arguments
The write_bedgraphfile function runs the softclipp_graph . py script for the given chromosome with the given arguments
""" The write_bedgraphfile function runs the softclipp_graph.py script for the given chromosome with the given
    arguments

    :param chromosome: Int or Str specifying the chromosome.
    """
chromosome
Int or Str specifying the chromosome.
Int or Str specifying the chromosome .