scripts/export/fasta_gen_handler.py
def parse_arguments():
    """
    Basic argument parsing using python's argparse

    return: Argparse parser object
    """

    parser = argparse.ArgumentParser("Rfam fasta file generation handler")

    parser.add_argument('--seq-db', help="Sequence database in fasta format",
                        action="store", default=None)
    parser.add_argument('--outdir', help="Output directory", action="store")

    parser.add_argument('-f', help='A file with a list of Rfam family accessions',
                        action="store", default=None)

    return parser

    Basic argument parsing using python's argparse

    return: Argparse parser object
    
Basic argument parsing using python's argparse
return: Argparse parser object
Basic argument parsing using python ' s argparse return : Argparse parser object
def parse_arguments():
    parser = argparse.ArgumentParser("Rfam fasta file generation handler")
    parser.add_argument('--seq-db', help="Sequence database in fasta format",
                        action="store", default=None)
    parser.add_argument('--outdir', help="Output directory", action="store")
    parser.add_argument('-f', help='A file with a list of Rfam family accessions',
                        action="store", default=None)
    return parser
def parse_arguments ( ) : parser = argparse . ArgumentParser ( "Rfam fasta file generation handler" ) parser . add_argument ( '--seq-db' , help = "Sequence database in fasta format" , action = "store" , default = None ) parser . add_argument ( '--outdir' , help = "Output directory" , action = "store" ) parser . add_argument ( '-f' , help = 'A file with a list of Rfam family accessions' , action = "store" , default = None ) return parser
Basic argument parsing using python's argparse
return: Argparse parser object
Basic argument parsing using python ' s argparse return : Argparse parser object
"""
    Basic argument parsing using python's argparse

    return: Argparse parser object
    """