gbeflow/__init__.py
def print_summary(self):
        '''Prints a summary of data dimensions
        Assumes that the data is a standard brightfield timelapse collection, e.g. (?, roi, channel, time, z, x, y, ?)
        '''
        
        print('''
            There are {0} ROIs,
                       {1} channels and
                       {2} timepoints.
            '''.format(self.raw_im.shape[1],
                      self.raw_im.shape[2],
                      self.raw_im.shape[3]))
        
        print(self.raw_im.shape)
              
        print('''
            The 3D dimensions of the data are:
            {0} x {1} x {2} (zyx)
            '''.format(self.raw_im.shape[-4],
                      self.raw_im.shape[-3],
                      self.raw_im.shape[-2]))
Prints a summary of data dimensions
        Assumes that the data is a standard brightfield timelapse collection, e.g. (?, roi, channel, time, z, x, y, ?)
        
Prints a summary of data dimensions
Assumes that the data is a standard brightfield timelapse collection, e.g.
Prints a summary of data dimensions Assumes that the data is a standard brightfield timelapse collection e . g .
def print_summary(self):
        print('''
            There are {0} ROIs,
                       {1} channels and
                       {2} timepoints.
            '''.format(self.raw_im.shape[1],
                      self.raw_im.shape[2],
                      self.raw_im.shape[3]))
        print(self.raw_im.shape)
        print('''
            The 3D dimensions of the data are:
            {0} x {1} x {2} (zyx)
            '''.format(self.raw_im.shape[-4],
                      self.raw_im.shape[-3],
                      self.raw_im.shape[-2]))
def print_summary ( self ) : print ( '''
            There are {0} ROIs,
                       {1} channels and
                       {2} timepoints.
            ''' . format ( self . raw_im . shape [ 1 ] , self . raw_im . shape [ 2 ] , self . raw_im . shape [ 3 ] ) ) print ( self . raw_im . shape ) print ( '''
            The 3D dimensions of the data are:
            {0} x {1} x {2} (zyx)
            ''' . format ( self . raw_im . shape [ - 4 ] , self . raw_im . shape [ - 3 ] , self . raw_im . shape [ - 2 ] ) )
Prints a summary of data dimensions
Assumes that the data is a standard brightfield timelapse collection, e.g.
Prints a summary of data dimensions Assumes that the data is a standard brightfield timelapse collection e . g .
'''Prints a summary of data dimensions
        Assumes that the data is a standard brightfield timelapse collection, e.g. (?, roi, channel, time, z, x, y, ?)
        '''
self