How to make Venn diagram for the Macs peak calling output of two data sets? I have two outputs of macs2 peak calling for two of my data sets. I wanted to plot the Venn diagram to see how many peaks are shared. I mainly work on Unix/Linux. Do you know any way that I can have those diagrams plotted?

Much Appreciated
Check out the tool Intervene. It's exactly designed for this. Github link.