Where can I find the genotype frequencies for the SNP's that are tested at 23andMe, Ancestry and FTDNA/MyHeritage? I want to add the frequencies of the genotypes to a baseline of raw DNA data I've got from the DNA testing companies 23andMe, Ancestry and MyHeritage (tested at all). All in build 37 human genome.
Where can I find that information? Checked HapMap project to no avail, can't align with the rsId or positions used in the text files.
Thanks in advance for your help
gnomad is probably the most comprehensive allele frequency database that exists at the moment.
Depending on how many variants you need to query, you can either manually input them into the search bar, or if you have a lot more, then you can also directly download the vcfs under the downloads tab.
The default for V2 gnomad set is on the gr37 build.