Can a gff file be converted to a fasta file? I downloaded an annotated genome file in gff format here. I would like to use it for proteomics. Though I need it in fasta format. Is there any tool that converts gff to annotated fasta? I see the file contains the genome sequence in fasta format, but not annotated. Are those file formats convertable?
A gff is a file of annotation.  It generally doesn't include sequence information, so you can not inter-convert.  But the file on your page has a fasta entry at the bottom..  I'd just grab the bottom half of it, and if the sequence length looks right, that's likely what you want.