"megahit: command not found" after correct installation with miniconda I want to use MEGAHIT (git: https://github.com/voutcn/megahit) to assemble metagenome shotgun sequencing reads (illumina). 

I install the package with the command conda install -c bioconda megahit as described in on the github page which yields: 

Solving environment: done

## Package Plan ##

  environment location: /home/datura-workstation/miniconda3

  added / updated specs:
    - megahit


The following NEW packages will be INSTALLED:

  megahit            bioconda/linux-64::megahit-1.2.9-h8b12597_0


Proceed ([y]/n)?


Where I click yes and the packages is installed. However, after installation I am not able to use the command megahit as this results in the error: megahit: command not found.

I use Ubuntu 18.04.3 LTS and have installed miniconda3.

I reproduced the installation of megahit on a windows computer with a virtual machine using the same Ubuntu version. On my virtual Ubuntu I CAN use the megahit command.

Could anyone please help me solve this problem? I searched the internet but cannot find a good solution on the issue (also not on the github issue page of this package).
type conda info --envs.  Look at your list of environments.  Say it's base that has megahit in it, do conda activate base, then just do megahit.