How to convert files to ADAM format? I would like to convert BAM and VCF files to ADAM format.

How do I do that?
These transformations are quite simple with the adam-submit script packaged with ADAM.

Transformation of BAM files 

adam-submit -- transformAlignments sample.bam sample.alignments.adam


Transformation of VCF files

adam-submit -- transformVariants sample.vcf.gz sample.variants.adam