VR stereo rendering with Instancing I have been reading this paper by Timothy Wilson Fast Stereo Rendering for VR
and it would suit our game engine (DirectX 11) to use this method of stereo rendering. I have managed to get the game rendering Instanced and the screen squished into left and right areas like he mentions but am unable to get the SV_ClipDistance working correctly, when I use his methods or the method the jMonkeyEngine uses I get 4 views of the world! 

My question is does anyone know if you can write SV_RenderTargetArrayIndex in a pixel shader according to MSDN it says it can be read and written by the pixel shader but in all my experimentation I am unable to get the shader to compile, it complains about too many outputs. If I could get this to work the instancing would work by just setting the SV_RenderTargetArrayIndex to SV_InstanceId. Any help would be much appreciated.
While this MSDN page does claim that SV_RenderTargetArrayIndex can be written in a pixel shader, I believe this is incorrect. Viewport array index and RT array index values are both intended to be output by the geometry shader stage. They can then be read by the pixel shader (and have a constant value per-primitive, based on the GS output). However, it is not possible to set these values from the pixel shader.

The stereo instancing approach detailed in those slides is interesting precisely because it avoids using slow geometry shaders. However, if you're not using GS, you can't use multiple viewports or render target arrays. That's why the stereo instancing approach uses one large viewport and bakes each eye's viewport transform into its projection matrix, and requires clip planes.

Clip planes should work, so if you're having problems with them, you could post another question detailing the specific issues (preferably with screenshots) and we can try to figure that out.

(For completeness, note that if you're using OpenGL, the GL_AMD_vertex_shader_viewport_index extension is available on recent GPUs from all three IHVs and allows setting the viewport index from the vertex shader.)