Why disable Postgres Autovacuum?
There is no good reason to keep autovacuum disabled in a production database, and you will run into problems if you do that.

It may make sense to disable autovacuum during exceptional operations, where you run a manual vacuum anyway and don't want your performance sapped by a background job, but more often than not such trickery is a premature optimization.

I would run VACUUM (FULL) on the database, followed by VACUUM (ANALYZE). That shoud take care of any damage done.

Then enable autovacuum.