Alternative ways to find tables with specific storage engine?
Login as root@localhost and query information_schema.tables by Storage Engine

SELECT table_schema,table_name
FROM information_schema.tables
WHERE engine='InnoDB';


To locate the InnoDB tables that are belong to you, run this

SELECT table_schema,table_name
FROM information_schema.tables
WHERE engine='InnoDB'
AND table_schema NOT IN
('information_schema','performance_schema','mysql');


GIVE IT A TRY !!!