Cannot open some tables in phpmyadmin
You can copy frm and ibd files ONLY if the tablespace ID in idb file is the same as the tablespace ID in ibdata1, if it's not then the data will be corrupt and you will be missing tables. 

When I had that problem I used this resource to recover files:


Recover InnoDB into MySQL


You may also find these links useful:


Recover InnoDB from ibd File
Manually Importing InnoDB MySQL Table Files