Restoring mysql data from *.IBD file
In this case, I wanted to restore my data on another database rather than the live one.
First of all you should take all of your old data from the following location on your old server and move them to your new VPS. 
old destination would be:
/var/lib/mysql/your_db_name

so I created another database called new_db  then start to creating the tables by the CREATE TABLE statement that I had from my live database, maybe you can find them in your codes.
by doing these, you will have all your tables but empty ones.
let’s assume that you placed the old data files in the:
/location/to/old_files/

and
you created a new empty database called new_db.
this is time to restoring your old data, please follow next steps for each one of your tables:

discarding new data file from its structure by executing
following command on the mysql  where has access to your new
database new_db:
ALTER TABLE my_table DISCARD TABLESPACE;


coping the old data files to the same table structure but in
the new database location:

CP /location/to/old_files/my_table.ibd /var/lib/mysql/new_db/my_table.ibd


change the ownership of the ids file which recently copied in the
new database should be changed to mysql:mysql:

sudo chown mysql:mysql /var/lib/mysql/new_db/my_table.ibd


finally, you can execute this command where you executed the previous one:

ALTER TABLE my_table IMPORT TABLESPACE; 

it works for me.