On which classes of graphs is resource constrained shortest path (RCSP) NP-hard?
I don't know if you're still interested in this (old) question, and if I understood well the resource constraints you gave in the comment; however it seems that your problem (which is slightly different from usual RCSP problems) is NP-complete for planar (undirected or directed or directed acyclic) graphs of max-degree 3.

The easy reduction is from 3-SAT. Given a formula $\varphi$ with $n$ variables $x_1,...x_n$ and $m$ clauses $C_1,...C_m$:


add a resource constraint set $M_k^+$ with two vertices for each positive literal $x_k$ in $\varphi$ and a resource constraint set $M_k^-$ with two vertices for each negative literal $\bar{x}_k$ in $\varphi$;
start building a graph from a source node $s$ and for each variable $x_i$ split the path in two lines: the upper one traverses one vertex of all the $M_k^-$ that correspond to a negative literal $\bar{x}_k$; the lower one traverses one vertex of all the $M_k^+$  that correspond to a positive literal $x_k$;
then for each $C_j$ split the path in 3 lines that traverse in parallel the 3 vertices corresponding to the literals of $C_j$ and that are picked from the corresponding $M_k^+$ or $M_k^-$;
finally add a sink node $t$.


A path from $s$ to $t$ exists if and only if the original formula is satisfiable (i.e.  without loss of generality you can ask for a path of length $\leq |V|$).

Informally when traversing the variable section $x_i$, if you pick the upper line (true assignment) then you must "use" one of the vertices of all the $M_k^-$ resource constraint sets that also contain a vertex that can be used later to traverse (satisfy) a clause containing $\bar{x}_i$. If you pick the lower line (false assignment) then you must "use" one of the vertices of all the $M_k^+$ resource constraint sets that also contain a vertex that can be used later to traverse (satisfy) a clause containing $x_i$. When traversing each clause at least one of the three vertices must be contained in a $M_k$ that has not be "used" yet (i.e. at least one of them can be used to satisfy the clause).

The following figure should make the reduction clearer. The resource constraint sets $M_k$ are represented with distinct colors (and for every color there are exactly 2 vertices).



$C_1 = x_1 \lor \bar{x}_2 \lor x_3$
$C_2 = x_2 \lor \bar{x}_3 \lor x_4$
$C_3 = \bar{x}_1 \lor x_3 \lor \bar{x}_2$

You can also easily make the graph directed, acyclic and bipartite. Let me know if you need further details (or if I completely misunderstood the problem :-).

As noted by Saaed the problem is fixed-parameter tractable with respect to $k$ (just consider all possible subsets of constrained nodes and for each combination run the shortest path algorithm).