What is the current state of the art in black-box grammar induction?
de la Higuera's book focuses mostly on the classical theory of Angluin style learning of finite state automata and related results. This theory has been lifted to the class of context free grammars and beyond to multiple context free grammars etc. using what is called "distributional learning" which in its modern form started with Clark &amp; Eyraud paper in JMLR 2007 (I was the first author). The most recent papers in this line of research are  Chihiro Shibata, Ryo Yoshinaka:
Probabilistic learnability of context-free grammars with basic distributional properties from positive examples. Theor. Comput. Sci. 620: 46-72 (2016) which looks at learning when the samples are generated by a PCFG.
There are analogues of the basic Angluin results using membership queries etc as well, and results for strong learning where you want to recover a CFG which generates the same trees as the target grammar (Learning Trees from Strings, Clark JMLR 2013). 
(Apologies for the self citations) 

I wasn't familiar with the Bastani paper, but it seems to be a heuristic paper with no theoretical guarantees.