Multi-language DFA minimisation
Short answer. Given a finite family of regular languages $\mathcal{L} = (L_i)_{1 \leqslant i \leqslant n}$, there is a unique minimal deterministic complete multi-automaton recognizing this family. 

Details. The case $n = 1$ corresponds to the standard construction and the general case is not much different in spirit. Given a language $L$ and a word $u$, let $u^{-1}L = \{ v \in A^* \mid uv \in L \}$. Define an equivalence relation $\sim$ on $A^*$ by setting
$$
 u \sim v \iff \text{for each }L \in \mathcal{L},\ u^{-1}L = v^{-1}L
$$
Since the $L_i$ are regular, this congruence has finite index. Further, it is easy to see that each $L_i$ is saturated by $\sim$ and that for each $a \in A$, $u \sim v$ implies $ua \sim va$. Let us denote by $1$ the empty word and by $[u]$ the $\sim$-class of a word $u$. Let $\mathcal{A}_\mathcal{L} = (Q, [1], \cdot, (F_i)_{1 \leqslant i \leqslant n})$ be the deterministic multi-automaton defined as follows:


$Q = \{ [u] \mid u \in A^*\}$,
$[u] \cdot a = [ua]$,
$F_i = \{ [u] \mid u \in L_i\}$.  


By construction, $[1] \cdot u \in F_i$ if and only if $u \in L_i$ and hence $\mathcal{A}_\mathcal{L}$ accepts the family $\mathcal{L}$. It remains to prove that $\mathcal{A}_\mathcal{L}$ is minimal. It is actually minimal in a strong algebraic sense (which implies that it has the minimal number of states). Let $\mathcal{A} = (Q, q_-, \cdot, (F_i)_{1 \leqslant i \leqslant n})$ and $\mathcal{A}' = (Q', q'_-, \cdot, (F'_i)_{1 \leqslant i \leqslant n})$ be two multi-automata. A morphism $f: \mathcal{A} \to \mathcal{A}'$ is a surjective map from $Q$ onto $Q'$ such that


$f(q_-) = q'_-$,
for $1 \leqslant i \leqslant n$, $f^{-1}(F'_i) = F_i$,   
for all $u \in A^*$ and $q \in Q$, $f(q \cdot u) = f(q) \cdot u$.


Then for any accessible deterministic multi-automaton $\mathcal{A}$ accepting $\mathcal{L}$, there is a morphism from $\mathcal{A}$ onto $\mathcal{A}_\mathcal{L}$. To prove this, one  first verifies that if $q_- \cdot u_1 = q_- \cdot u_2 = q$, then $u_1 \sim u_2$. Now $f$ is defined by $f(q) = [u]$ where $u$ is any word such that $q_- \cdot u = q$. Then one can show that $f$ satisfies the three required properties.

The end is a bit sketchy, let me know if you need more details.