Algorithm with $O(n)$ time and $O(n)$ space to compare two arrays
A HashSet can store $n$ elements in $\mathcal{O}(n)$ space and add/query elements in amortized $\mathcal{O}(1)$ time. Therefore we can use the following approaches:

1. Are A's values distinct?

HashSet setA;
for i in {1, ..., n}
    if setA.contains(A[i])
        return "No, A[i] is a duplicate.";
    endif
    setA.add(A[i])
endfor
return "Yes, values are distinct.";


2. Do A and B intersect?

HashSet setA, setB;
for i in {1, ..., n}
    if setB.contains(A[i]) or setA.contains(B[i])
        return "Yes, A and B intersect.";
    endif
    setA.add(A[i]);
    setB.add(B[i]);
endfor
return "No, A and B are disjoint.";


Edit: Thanks to D'Nabre for pointing out a problem. The assumed $\mathcal{O}(1)$ for querying the HashSets may not work out in this case. D'Nabre also pointed at the element distinctness problem, which is worth a look. From Wikipedia:


  it may also be solved in linear expected time by a randomized algorithm that inserts each item into a hash table and compares only those elements that are placed in the same hash table cell.