Do deep section wheels sound different?
The source of the whooshing sound is contact between tires and road. The sound is present with all road bikes, but much quieter with aluminum rims and tires with thick sidewalls.

What makes carbon wheels loud is that they resonate like acoustic instrument's sound box at the tire noise frequency range and the larger surface is more efficient at transmitting the sound. You can hear the resonant frequencies if you just tap the wheel with your finger nail, a carbon wheel will have a lower pitched and much louder sound.