Can I use blockfilterindex in pruned mode?
The block filter index is build asynchronously from block downloading and validation. It is possible that the thread handing block storage and pruning could be enough ahead of the thread building the block filter index that it starts to delete blocks before the index thread processes them. This would be bad. So for the initial block filter index implementation, it was decided to simply disallow pruning when the block filter index is enabled. You can read some of the reasoning and discussion in the PR.
In theory it is possible to allow pruning with the block filter index. However it is more work to do this and at least for the initial implementation, the extra code wasn't worth it. PR authors often do this to keep the PR small enough to be reviewed. This functionality could be added in the future as it is part of the more general problem of how we should handle pruning with the wallet and with the txindex.