How to filter data obtained with practical measurements and simulations to be concisely put into a paper?
Read a couple of dozen papers that are similar in nature (that is, in terms of the method and how the research question is addresssed) to yours and are in your target journal. Look at how they've supplied the sort of detailed information you're talking about.

As a rule-of-thumb, put it all into supplementary information. And then follow the advice of your edit and peer-reviewers, if they advise moving things. If there are particular numbers that contribute to your main narrative, put those numbers in the body of the paper, too.