Lithium Ion Battery Pack - Looking to calculate watt-hours from V1 to V2
Alrighty, so there will be the answer that we can extract from the information on the datasheet/discharge curve chart. That will give you a fairly good idea of what to expect. Or if you want more that than you can run tests on your specific cells to find out. But I think you are just needing a more of a ballpark answer. Ballpark is the only thing that is really of any value, unless you know exactly what temperature the cells will be at all the time as well as some other variables.

So, li-ion cells have a non-linear discharge curve. If we look up the discharge curve for your particular cells it will look something like this one.



Now you can understand why you would need to know the current draw if you wanted more than a ballpark guess; the capacity in W-H changes with load because different loads cause different voltage sags.

So anyways, lets assume we are talking about 2A draw only. Look at the 2A curve (the black line with a negative slope)
You are saying you wanted to set the cutoff at 3v. Well since we are ballparking, we can notice that the discharge curve for the region you are interested in is close enough to linear that you could just easily calculate the area under the curve without an integral. 

If you aren't sure if you need the capacity in WH or just AH well ah is easily found by just finding the capacity that relates to the cutoff voltage you want in the discharge curve.

If you do want WH though: 
If we say the voltage range is 4.1 to 3.1, and the capacity is 3.2ah well then you get a rectangle with a triangle on top of it that you can find the area of and know your Watt Hours. WH = (3.2*3.1) + 1/2(3.2* (4.1-3.1))