Using data mining of papers in order to derive genomic connections
There are many databases that have used publication scraping for oncogenic gene fusions. There are publications for the individual methods they used for their scraping and aggregation.


COSMIC - http://cancer.sanger.ac.uk/cosmic
TICdb - http://www.unav.es/genetica/TICdb/
ChimerDB - http://ercsb.ewha.ac.kr/fusiongene/ -
https://www.ncbi.nlm.nih.gov/pubmed/27899563