Genome annotation of a Bacillus strain
You said that you want to compare with other microbial genome data. Have you already annotated your genome? If not, you might consider a pipeline I've developed, I can gladly help if you face some problems using it.

It is called bacannot, it does a complete annotation using Prokka, Kofam, CARD, VFDB, and other resources. It might help you to have a first scratch of your data since it also collapses annotation information in a genome browser