Where did I go wrong by trying to add an extra motor to my board?
D35, D37, D17 are the pin labels on the Arduino Mega. These do not correspond to pin numbers within Marlin.

I believe that D35 actually corresponds to marlin pin 49 and this is the number you should enter in your firmware. You can find the mapping in fastio_1280.h:

Hardware Pin  : 02 03 06 07 01 05 15 16 17 18 23 24 25 26 64 63 13 12 46 45 44 43 78 77 76 75 74 73 72 71 60 59 58 57 56 55 54 53 50 70 52 51 42 41 40 39 38 37 36 35 22 21 20 19 97 96 95 94 93 92 91 90 89 88 87 86 85 84 83 82 04 08 09 10 11 14 27 28 29 30 31 32 33 34 47 48 49 61 62 65 66 67 68 69 79 80 81 98 99 100
Port          : E0 E1 E4 E5 G5 E3 H3 H4 H5 H6 B4 B5 B6 B7 J1 J0 H1 H0 D3 D2 D1 D0 A0 A1 A2 A3 A4 A5 A6 A7 C7 C6 C5 C4 C3 C2 C1 C0 D7 G2 G1 G0 L7 L6 L5 L4 L3 L2 L1 L0 B3 B2 B1 B0 F0 F1 F2 F3 F4 F5 F6 F7 K0 K1 K2 K3 K4 K5 K6 K7 E2 E6 E7 xx xx H2 H7 G3 G4 xx xx xx xx xx D4 D5 D6 xx xx J2 J3 J4 J5 J6 J7 xx xx xx xx xx
Logical Pin   : 00 01 02 03 04 05 06 07 08 09 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 xx xx xx xx xx xx xx xx xx xx xx xx xx xx xx xx xx xx xx xx xx xx xx xx xx xx xx xx xx xx


Look on the top row for the pin number (e.g. D35 corresponds to 35), then look on the bottom row to find the pin number to use in Marlin (in this case, 49).