G28 ignoring Z-Probe X/Y Offsets
You need to enable the constant Z_SAFE_HOMING (like: #define Z_SAFE_HOMING) in your printer configuration file (if you're using Marlin firmware that is). This will move the nozzle to the middle of the plate prior to lowering the nozzle by default:

#if ENABLED(Z_SAFE_HOMING)
  #define Z_SAFE_HOMING_X_POINT ((X_BED_SIZE) / 2)    // X point for Z homing when homing all axes (G28).
  #define Z_SAFE_HOMING_Y_POINT ((Y_BED_SIZE) / 2)    // Y point for Z homing when homing all axes (G28).
#endif